Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
Rcl1Q9JJT0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rcl1Q9JJT0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rcl1Q9JJT0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcl1Q9JJT0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcl1Q9JJT0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rcl1Q9JJT0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rcl1Q9JJT0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.08■□□□□ 0.97
Rcl1Q9JJT0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rcl1Q9JJT0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rcl1Q9JJT0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rcl1Q9JJT0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.05■□□□□ 0.96
Rcl1Q9JJT0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rcl1Q9JJT0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rcl1Q9JJT0 Mipep-204ENSMUST00000225043 1548 ntBASIC21.04■□□□□ 0.96
Rcl1Q9JJT0 Gm24804-201ENSMUST00000174982 85 ntBASIC21.04■□□□□ 0.96
Rcl1Q9JJT0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rcl1Q9JJT0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.01■□□□□ 0.95
Rcl1Q9JJT0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rcl1Q9JJT0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rcl1Q9JJT0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rcl1Q9JJT0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rcl1Q9JJT0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Rcl1Q9JJT0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.97■□□□□ 0.95
Rcl1Q9JJT0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rcl1Q9JJT0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rcl1Q9JJT0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rcl1Q9JJT0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rcl1Q9JJT0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rcl1Q9JJT0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rcl1Q9JJT0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rcl1Q9JJT0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rcl1Q9JJT0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rcl1Q9JJT0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rcl1Q9JJT0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rcl1Q9JJT0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rcl1Q9JJT0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rcl1Q9JJT0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rcl1Q9JJT0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Rcl1Q9JJT0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rcl1Q9JJT0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rcl1Q9JJT0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Rcl1Q9JJT0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rcl1Q9JJT0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.84■□□□□ 0.93
Rcl1Q9JJT0 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.83■□□□□ 0.93
Rcl1Q9JJT0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rcl1Q9JJT0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rcl1Q9JJT0 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.81■□□□□ 0.92
Rcl1Q9JJT0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rcl1Q9JJT0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rcl1Q9JJT0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.78■□□□□ 0.92
Rcl1Q9JJT0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rcl1Q9JJT0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rcl1Q9JJT0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rcl1Q9JJT0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.77■□□□□ 0.91
Rcl1Q9JJT0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rcl1Q9JJT0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.76■□□□□ 0.91
Rcl1Q9JJT0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.74■□□□□ 0.91
Rcl1Q9JJT0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcl1Q9JJT0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcl1Q9JJT0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rcl1Q9JJT0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rcl1Q9JJT0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rcl1Q9JJT0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rcl1Q9JJT0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rcl1Q9JJT0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.68■□□□□ 0.9
Rcl1Q9JJT0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rcl1Q9JJT0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rcl1Q9JJT0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rcl1Q9JJT0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rcl1Q9JJT0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Peli2-204ENSMUST00000226513 1320 ntBASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Rcl1Q9JJT0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rcl1Q9JJT0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rcl1Q9JJT0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rcl1Q9JJT0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rcl1Q9JJT0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rcl1Q9JJT0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rcl1Q9JJT0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rcl1Q9JJT0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rcl1Q9JJT0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms