Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
Rcl1Q9JJT0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rcl1Q9JJT0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rcl1Q9JJT0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcl1Q9JJT0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rcl1Q9JJT0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rcl1Q9JJT0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rcl1Q9JJT0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.08■□□□□ 0.97
Rcl1Q9JJT0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rcl1Q9JJT0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rcl1Q9JJT0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rcl1Q9JJT0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.05■□□□□ 0.96
Rcl1Q9JJT0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rcl1Q9JJT0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rcl1Q9JJT0 Mipep-204ENSMUST00000225043 1548 ntBASIC21.04■□□□□ 0.96
Rcl1Q9JJT0 Gm24804-201ENSMUST00000174982 85 ntBASIC21.04■□□□□ 0.96
Rcl1Q9JJT0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rcl1Q9JJT0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.01■□□□□ 0.95
Rcl1Q9JJT0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rcl1Q9JJT0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rcl1Q9JJT0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rcl1Q9JJT0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rcl1Q9JJT0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Rcl1Q9JJT0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.97■□□□□ 0.95
Rcl1Q9JJT0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rcl1Q9JJT0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rcl1Q9JJT0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rcl1Q9JJT0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rcl1Q9JJT0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rcl1Q9JJT0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rcl1Q9JJT0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rcl1Q9JJT0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rcl1Q9JJT0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rcl1Q9JJT0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rcl1Q9JJT0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rcl1Q9JJT0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rcl1Q9JJT0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rcl1Q9JJT0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rcl1Q9JJT0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Rcl1Q9JJT0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rcl1Q9JJT0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rcl1Q9JJT0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Rcl1Q9JJT0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rcl1Q9JJT0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.84■□□□□ 0.93
Rcl1Q9JJT0 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.83■□□□□ 0.93
Rcl1Q9JJT0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rcl1Q9JJT0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rcl1Q9JJT0 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.81■□□□□ 0.92
Rcl1Q9JJT0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rcl1Q9JJT0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rcl1Q9JJT0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.78■□□□□ 0.92
Rcl1Q9JJT0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rcl1Q9JJT0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rcl1Q9JJT0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rcl1Q9JJT0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.77■□□□□ 0.91
Rcl1Q9JJT0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rcl1Q9JJT0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.76■□□□□ 0.91
Rcl1Q9JJT0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rcl1Q9JJT0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.74■□□□□ 0.91
Rcl1Q9JJT0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcl1Q9JJT0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcl1Q9JJT0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rcl1Q9JJT0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rcl1Q9JJT0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rcl1Q9JJT0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rcl1Q9JJT0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcl1Q9JJT0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rcl1Q9JJT0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rcl1Q9JJT0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.68■□□□□ 0.9
Rcl1Q9JJT0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rcl1Q9JJT0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rcl1Q9JJT0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rcl1Q9JJT0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rcl1Q9JJT0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Peli2-204ENSMUST00000226513 1320 ntBASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.65■□□□□ 0.9
Rcl1Q9JJT0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Rcl1Q9JJT0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rcl1Q9JJT0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rcl1Q9JJT0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rcl1Q9JJT0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rcl1Q9JJT0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rcl1Q9JJT0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rcl1Q9JJT0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rcl1Q9JJT0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rcl1Q9JJT0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 150.4 ms