Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Herpud1Q9JJK5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herpud1Q9JJK5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herpud1Q9JJK5 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.91■□□□□ 0.94
Herpud1Q9JJK5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Herpud1Q9JJK5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Herpud1Q9JJK5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Herpud1Q9JJK5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Herpud1Q9JJK5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herpud1Q9JJK5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Herpud1Q9JJK5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herpud1Q9JJK5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Herpud1Q9JJK5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Herpud1Q9JJK5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Herpud1Q9JJK5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Herpud1Q9JJK5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Herpud1Q9JJK5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.84■□□□□ 0.93
Herpud1Q9JJK5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Herpud1Q9JJK5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.83■□□□□ 0.92
Herpud1Q9JJK5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Herpud1Q9JJK5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herpud1Q9JJK5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Herpud1Q9JJK5 Peli2-204ENSMUST00000226513 1320 ntBASIC20.8■□□□□ 0.92
Herpud1Q9JJK5 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.8■□□□□ 0.92
Herpud1Q9JJK5 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.8■□□□□ 0.92
Herpud1Q9JJK5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herpud1Q9JJK5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herpud1Q9JJK5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herpud1Q9JJK5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herpud1Q9JJK5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herpud1Q9JJK5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herpud1Q9JJK5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.77■□□□□ 0.91
Herpud1Q9JJK5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Herpud1Q9JJK5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud1Q9JJK5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud1Q9JJK5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herpud1Q9JJK5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Herpud1Q9JJK5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Herpud1Q9JJK5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herpud1Q9JJK5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Herpud1Q9JJK5 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.74■□□□□ 0.91
Herpud1Q9JJK5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herpud1Q9JJK5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herpud1Q9JJK5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Herpud1Q9JJK5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Herpud1Q9JJK5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Herpud1Q9JJK5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herpud1Q9JJK5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herpud1Q9JJK5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herpud1Q9JJK5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Herpud1Q9JJK5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud1Q9JJK5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Herpud1Q9JJK5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herpud1Q9JJK5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herpud1Q9JJK5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.66■□□□□ 0.9
Herpud1Q9JJK5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herpud1Q9JJK5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herpud1Q9JJK5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Herpud1Q9JJK5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Herpud1Q9JJK5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Herpud1Q9JJK5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herpud1Q9JJK5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herpud1Q9JJK5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herpud1Q9JJK5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herpud1Q9JJK5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herpud1Q9JJK5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud1Q9JJK5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud1Q9JJK5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Herpud1Q9JJK5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Herpud1Q9JJK5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Herpud1Q9JJK5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud1Q9JJK5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud1Q9JJK5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud1Q9JJK5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herpud1Q9JJK5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.59■□□□□ 0.89
Herpud1Q9JJK5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Herpud1Q9JJK5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Herpud1Q9JJK5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud1Q9JJK5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herpud1Q9JJK5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Herpud1Q9JJK5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud1Q9JJK5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Herpud1Q9JJK5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Herpud1Q9JJK5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herpud1Q9JJK5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herpud1Q9JJK5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herpud1Q9JJK5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.53■□□□□ 0.88
Herpud1Q9JJK5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Herpud1Q9JJK5 Gm24804-201ENSMUST00000174982 85 ntBASIC20.51■□□□□ 0.87
Herpud1Q9JJK5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.5■□□□□ 0.87
Herpud1Q9JJK5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Herpud1Q9JJK5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.5■□□□□ 0.87
Herpud1Q9JJK5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Herpud1Q9JJK5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Herpud1Q9JJK5 Amer2-203ENSMUST00000225247 2662 ntBASIC20.49■□□□□ 0.87
Herpud1Q9JJK5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Herpud1Q9JJK5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Herpud1Q9JJK5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Herpud1Q9JJK5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.47■□□□□ 0.87
Herpud1Q9JJK5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms