Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lrrc40Q9CRC8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Lrrc40Q9CRC8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lrrc40Q9CRC8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lrrc40Q9CRC8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lrrc40Q9CRC8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lrrc40Q9CRC8 Zxda-201ENSMUST00000117281 2621 ntBASIC25.22■■□□□ 1.63
Lrrc40Q9CRC8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Lrrc40Q9CRC8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.21■■□□□ 1.63
Lrrc40Q9CRC8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Lrrc40Q9CRC8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Lrrc40Q9CRC8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Lrrc40Q9CRC8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Lrrc40Q9CRC8 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.2■■□□□ 1.62
Lrrc40Q9CRC8 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.2■■□□□ 1.62
Lrrc40Q9CRC8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Lrrc40Q9CRC8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Lrrc40Q9CRC8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Lrrc40Q9CRC8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Lrrc40Q9CRC8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lrrc40Q9CRC8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lrrc40Q9CRC8 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.13■■□□□ 1.61
Lrrc40Q9CRC8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Lrrc40Q9CRC8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.11■■□□□ 1.61
Lrrc40Q9CRC8 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.1■■□□□ 1.61
Lrrc40Q9CRC8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Lrrc40Q9CRC8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Lrrc40Q9CRC8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lrrc40Q9CRC8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Lrrc40Q9CRC8 Gm24804-201ENSMUST00000174982 85 ntBASIC25.07■■□□□ 1.6
Lrrc40Q9CRC8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lrrc40Q9CRC8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lrrc40Q9CRC8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Lrrc40Q9CRC8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Lrrc40Q9CRC8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Lrrc40Q9CRC8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Lrrc40Q9CRC8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Lrrc40Q9CRC8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lrrc40Q9CRC8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Lrrc40Q9CRC8 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.05■■□□□ 1.6
Lrrc40Q9CRC8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Lrrc40Q9CRC8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Lrrc40Q9CRC8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Lrrc40Q9CRC8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Lrrc40Q9CRC8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lrrc40Q9CRC8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lrrc40Q9CRC8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25■■□□□ 1.59
Lrrc40Q9CRC8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lrrc40Q9CRC8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Lrrc40Q9CRC8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Lrrc40Q9CRC8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Lrrc40Q9CRC8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
Lrrc40Q9CRC8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.95■■□□□ 1.58
Lrrc40Q9CRC8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Lrrc40Q9CRC8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Lrrc40Q9CRC8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrrc40Q9CRC8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrrc40Q9CRC8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrrc40Q9CRC8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrrc40Q9CRC8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Lrrc40Q9CRC8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Lrrc40Q9CRC8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Lrrc40Q9CRC8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Lrrc40Q9CRC8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Lrrc40Q9CRC8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Lrrc40Q9CRC8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Lrrc40Q9CRC8 Gm16148-201ENSMUST00000119653 893 ntBASIC24.84■■□□□ 1.57
Lrrc40Q9CRC8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.84■■□□□ 1.57
Lrrc40Q9CRC8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Lrrc40Q9CRC8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Lrrc40Q9CRC8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Lrrc40Q9CRC8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.8■■□□□ 1.56
Lrrc40Q9CRC8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Lrrc40Q9CRC8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Lrrc40Q9CRC8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.78■■□□□ 1.56
Lrrc40Q9CRC8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.78■■□□□ 1.56
Lrrc40Q9CRC8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
Lrrc40Q9CRC8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Lrrc40Q9CRC8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
Lrrc40Q9CRC8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.76■■□□□ 1.55
Lrrc40Q9CRC8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Lrrc40Q9CRC8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lrrc40Q9CRC8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lrrc40Q9CRC8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lrrc40Q9CRC8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.74■■□□□ 1.55
Lrrc40Q9CRC8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lrrc40Q9CRC8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Lrrc40Q9CRC8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lrrc40Q9CRC8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Lrrc40Q9CRC8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Lrrc40Q9CRC8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Lrrc40Q9CRC8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lrrc40Q9CRC8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lrrc40Q9CRC8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.55
Lrrc40Q9CRC8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Lrrc40Q9CRC8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Lrrc40Q9CRC8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Lrrc40Q9CRC8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Lrrc40Q9CRC8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Lrrc40Q9CRC8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms