Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Retreg3Q9CQV4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Retreg3Q9CQV4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Retreg3Q9CQV4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.72■■□□□ 1.71
Retreg3Q9CQV4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.72■■□□□ 1.71
Retreg3Q9CQV4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.71■■□□□ 1.71
Retreg3Q9CQV4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Retreg3Q9CQV4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Retreg3Q9CQV4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.69■■□□□ 1.7
Retreg3Q9CQV4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Retreg3Q9CQV4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Retreg3Q9CQV4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Retreg3Q9CQV4 Gm16148-201ENSMUST00000119653 893 ntBASIC25.67■■□□□ 1.7
Retreg3Q9CQV4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Retreg3Q9CQV4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retreg3Q9CQV4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Retreg3Q9CQV4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retreg3Q9CQV4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.66■■□□□ 1.7
Retreg3Q9CQV4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retreg3Q9CQV4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retreg3Q9CQV4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retreg3Q9CQV4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retreg3Q9CQV4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retreg3Q9CQV4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retreg3Q9CQV4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Retreg3Q9CQV4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retreg3Q9CQV4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.61■■□□□ 1.69
Retreg3Q9CQV4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Retreg3Q9CQV4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Retreg3Q9CQV4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Retreg3Q9CQV4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.59■■□□□ 1.69
Retreg3Q9CQV4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Retreg3Q9CQV4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Retreg3Q9CQV4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retreg3Q9CQV4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Retreg3Q9CQV4 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.58■■□□□ 1.68
Retreg3Q9CQV4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retreg3Q9CQV4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retreg3Q9CQV4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.5■■□□□ 1.67
Retreg3Q9CQV4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Retreg3Q9CQV4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retreg3Q9CQV4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Retreg3Q9CQV4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retreg3Q9CQV4 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.48■■□□□ 1.67
Retreg3Q9CQV4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Retreg3Q9CQV4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
Retreg3Q9CQV4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Retreg3Q9CQV4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Retreg3Q9CQV4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retreg3Q9CQV4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retreg3Q9CQV4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retreg3Q9CQV4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retreg3Q9CQV4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Retreg3Q9CQV4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Retreg3Q9CQV4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Retreg3Q9CQV4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retreg3Q9CQV4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Retreg3Q9CQV4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retreg3Q9CQV4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Retreg3Q9CQV4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.39■■□□□ 1.66
Retreg3Q9CQV4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Retreg3Q9CQV4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Retreg3Q9CQV4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Retreg3Q9CQV4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Retreg3Q9CQV4 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.36■■□□□ 1.65
Retreg3Q9CQV4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retreg3Q9CQV4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Retreg3Q9CQV4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retreg3Q9CQV4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.33■■□□□ 1.65
Retreg3Q9CQV4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retreg3Q9CQV4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Retreg3Q9CQV4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Retreg3Q9CQV4 Zxda-201ENSMUST00000117281 2621 ntBASIC25.31■■□□□ 1.64
Retreg3Q9CQV4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retreg3Q9CQV4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
Retreg3Q9CQV4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Retreg3Q9CQV4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Retreg3Q9CQV4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Retreg3Q9CQV4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retreg3Q9CQV4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retreg3Q9CQV4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.26■■□□□ 1.63
Retreg3Q9CQV4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Retreg3Q9CQV4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Retreg3Q9CQV4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retreg3Q9CQV4 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.22■■□□□ 1.63
Retreg3Q9CQV4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retreg3Q9CQV4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retreg3Q9CQV4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Retreg3Q9CQV4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retreg3Q9CQV4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Retreg3Q9CQV4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.2■■□□□ 1.62
Retreg3Q9CQV4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retreg3Q9CQV4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Retreg3Q9CQV4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retreg3Q9CQV4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.19■■□□□ 1.62
Retreg3Q9CQV4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Retreg3Q9CQV4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Retreg3Q9CQV4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Retreg3Q9CQV4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retreg3Q9CQV4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms