Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.59■□□□□ 0.89
Rer1Q9CQU3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rer1Q9CQU3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Rer1Q9CQU3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rer1Q9CQU3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rer1Q9CQU3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Rer1Q9CQU3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.56■□□□□ 0.88
Rer1Q9CQU3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rer1Q9CQU3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rer1Q9CQU3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.54■□□□□ 0.88
Rer1Q9CQU3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.54■□□□□ 0.88
Rer1Q9CQU3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rer1Q9CQU3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rer1Q9CQU3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rer1Q9CQU3 Peli2-204ENSMUST00000226513 1320 ntBASIC20.52■□□□□ 0.87
Rer1Q9CQU3 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.51■□□□□ 0.87
Rer1Q9CQU3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rer1Q9CQU3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rer1Q9CQU3 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.48■□□□□ 0.87
Rer1Q9CQU3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rer1Q9CQU3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rer1Q9CQU3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rer1Q9CQU3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rer1Q9CQU3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rer1Q9CQU3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rer1Q9CQU3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rer1Q9CQU3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rer1Q9CQU3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rer1Q9CQU3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rer1Q9CQU3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rer1Q9CQU3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rer1Q9CQU3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rer1Q9CQU3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rer1Q9CQU3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rer1Q9CQU3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rer1Q9CQU3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rer1Q9CQU3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rer1Q9CQU3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rer1Q9CQU3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rer1Q9CQU3 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.4■□□□□ 0.86
Rer1Q9CQU3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rer1Q9CQU3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rer1Q9CQU3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rer1Q9CQU3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rer1Q9CQU3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rer1Q9CQU3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.37■□□□□ 0.85
Rer1Q9CQU3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rer1Q9CQU3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rer1Q9CQU3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rer1Q9CQU3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rer1Q9CQU3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rer1Q9CQU3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rer1Q9CQU3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rer1Q9CQU3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rer1Q9CQU3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rer1Q9CQU3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rer1Q9CQU3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rer1Q9CQU3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rer1Q9CQU3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rer1Q9CQU3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rer1Q9CQU3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rer1Q9CQU3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rer1Q9CQU3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Rer1Q9CQU3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.3■□□□□ 0.84
Rer1Q9CQU3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rer1Q9CQU3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rer1Q9CQU3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rer1Q9CQU3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rer1Q9CQU3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rer1Q9CQU3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rer1Q9CQU3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rer1Q9CQU3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Rer1Q9CQU3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Rer1Q9CQU3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rer1Q9CQU3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rer1Q9CQU3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rer1Q9CQU3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rer1Q9CQU3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rer1Q9CQU3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rer1Q9CQU3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rer1Q9CQU3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.24■□□□□ 0.83
Rer1Q9CQU3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rer1Q9CQU3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rer1Q9CQU3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.23■□□□□ 0.83
Rer1Q9CQU3 Gm24804-201ENSMUST00000174982 85 ntBASIC20.23■□□□□ 0.83
Rer1Q9CQU3 Amer2-203ENSMUST00000225247 2662 ntBASIC20.23■□□□□ 0.83
Rer1Q9CQU3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rer1Q9CQU3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.2■□□□□ 0.82
Rer1Q9CQU3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rer1Q9CQU3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.19■□□□□ 0.82
Rer1Q9CQU3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rer1Q9CQU3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rer1Q9CQU3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rer1Q9CQU3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rer1Q9CQU3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rer1Q9CQU3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rer1Q9CQU3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.16■□□□□ 0.82
Rer1Q9CQU3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rer1Q9CQU3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rer1Q9CQU3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms