Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
Trim11Q99PQ2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
Trim11Q99PQ2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.89■■■□□ 2.22
Trim11Q99PQ2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Trim11Q99PQ2 Zxda-201ENSMUST00000117281 2621 ntBASIC28.87■■■□□ 2.21
Trim11Q99PQ2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim11Q99PQ2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim11Q99PQ2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim11Q99PQ2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim11Q99PQ2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim11Q99PQ2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim11Q99PQ2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Trim11Q99PQ2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Trim11Q99PQ2 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.81■■■□□ 2.2
Trim11Q99PQ2 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.8■■■□□ 2.2
Trim11Q99PQ2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
Trim11Q99PQ2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Trim11Q99PQ2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Trim11Q99PQ2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Trim11Q99PQ2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Trim11Q99PQ2 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.75■■■□□ 2.19
Trim11Q99PQ2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Trim11Q99PQ2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Trim11Q99PQ2 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.74■■■□□ 2.19
Trim11Q99PQ2 Gm24804-201ENSMUST00000174982 85 ntBASIC28.73■■■□□ 2.19
Trim11Q99PQ2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Trim11Q99PQ2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
Trim11Q99PQ2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Trim11Q99PQ2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
Trim11Q99PQ2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
Trim11Q99PQ2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.7■■■□□ 2.18
Trim11Q99PQ2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Trim11Q99PQ2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trim11Q99PQ2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trim11Q99PQ2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Trim11Q99PQ2 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.68■■■□□ 2.18
Trim11Q99PQ2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Trim11Q99PQ2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Trim11Q99PQ2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Trim11Q99PQ2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Trim11Q99PQ2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Trim11Q99PQ2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Trim11Q99PQ2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim11Q99PQ2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
Trim11Q99PQ2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Trim11Q99PQ2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Trim11Q99PQ2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Trim11Q99PQ2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Trim11Q99PQ2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trim11Q99PQ2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Trim11Q99PQ2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Trim11Q99PQ2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Trim11Q99PQ2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trim11Q99PQ2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.56■■■□□ 2.16
Trim11Q99PQ2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Trim11Q99PQ2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.55■■■□□ 2.16
Trim11Q99PQ2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Trim11Q99PQ2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Trim11Q99PQ2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Trim11Q99PQ2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Trim11Q99PQ2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Trim11Q99PQ2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Trim11Q99PQ2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Trim11Q99PQ2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Trim11Q99PQ2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Trim11Q99PQ2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim11Q99PQ2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim11Q99PQ2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Trim11Q99PQ2 Gm16148-201ENSMUST00000119653 893 ntBASIC28.45■■■□□ 2.14
Trim11Q99PQ2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Trim11Q99PQ2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Trim11Q99PQ2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.43■■■□□ 2.14
Trim11Q99PQ2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Trim11Q99PQ2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Trim11Q99PQ2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
Trim11Q99PQ2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Trim11Q99PQ2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Trim11Q99PQ2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
Trim11Q99PQ2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.36■■■□□ 2.13
Trim11Q99PQ2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.35■■■□□ 2.13
Trim11Q99PQ2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.34■■■□□ 2.13
Trim11Q99PQ2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Trim11Q99PQ2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Trim11Q99PQ2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Trim11Q99PQ2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.33■■■□□ 2.13
Trim11Q99PQ2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Trim11Q99PQ2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trim11Q99PQ2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim11Q99PQ2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim11Q99PQ2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.32■■■□□ 2.12
Trim11Q99PQ2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.31■■■□□ 2.12
Trim11Q99PQ2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trim11Q99PQ2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim11Q99PQ2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Trim11Q99PQ2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim11Q99PQ2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Trim11Q99PQ2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Trim11Q99PQ2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim11Q99PQ2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Trim11Q99PQ2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.23■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms