Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb4Q91XZ6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.99■■□□□ 1.59
Pcdhb4Q91XZ6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhb4Q91XZ6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb4Q91XZ6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb4Q91XZ6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Pcdhb4Q91XZ6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.95■■□□□ 1.59
Pcdhb4Q91XZ6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb4Q91XZ6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb4Q91XZ6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb4Q91XZ6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb4Q91XZ6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb4Q91XZ6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb4Q91XZ6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb4Q91XZ6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.91■■□□□ 1.58
Pcdhb4Q91XZ6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb4Q91XZ6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb4Q91XZ6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.9■■□□□ 1.58
Pcdhb4Q91XZ6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb4Q91XZ6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb4Q91XZ6 Peli2-204ENSMUST00000226513 1320 ntBASIC24.89■■□□□ 1.58
Pcdhb4Q91XZ6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Pcdhb4Q91XZ6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.57
Pcdhb4Q91XZ6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb4Q91XZ6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb4Q91XZ6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
Pcdhb4Q91XZ6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhb4Q91XZ6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Pcdhb4Q91XZ6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhb4Q91XZ6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhb4Q91XZ6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
Pcdhb4Q91XZ6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb4Q91XZ6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.83■■□□□ 1.57
Pcdhb4Q91XZ6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb4Q91XZ6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.82■■□□□ 1.56
Pcdhb4Q91XZ6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Pcdhb4Q91XZ6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb4Q91XZ6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb4Q91XZ6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb4Q91XZ6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Pcdhb4Q91XZ6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Pcdhb4Q91XZ6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb4Q91XZ6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Pcdhb4Q91XZ6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb4Q91XZ6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb4Q91XZ6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb4Q91XZ6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb4Q91XZ6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Pcdhb4Q91XZ6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
Pcdhb4Q91XZ6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Pcdhb4Q91XZ6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
Pcdhb4Q91XZ6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Pcdhb4Q91XZ6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb4Q91XZ6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Pcdhb4Q91XZ6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb4Q91XZ6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb4Q91XZ6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb4Q91XZ6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb4Q91XZ6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb4Q91XZ6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb4Q91XZ6 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.67■■□□□ 1.54
Pcdhb4Q91XZ6 Gm24804-201ENSMUST00000174982 85 ntBASIC24.66■■□□□ 1.54
Pcdhb4Q91XZ6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb4Q91XZ6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb4Q91XZ6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb4Q91XZ6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Pcdhb4Q91XZ6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb4Q91XZ6 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.64■■□□□ 1.53
Pcdhb4Q91XZ6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb4Q91XZ6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb4Q91XZ6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
Pcdhb4Q91XZ6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcdhb4Q91XZ6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb4Q91XZ6 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.62■■□□□ 1.53
Pcdhb4Q91XZ6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb4Q91XZ6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb4Q91XZ6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb4Q91XZ6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb4Q91XZ6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb4Q91XZ6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Pcdhb4Q91XZ6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb4Q91XZ6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb4Q91XZ6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb4Q91XZ6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.58■■□□□ 1.53
Pcdhb4Q91XZ6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb4Q91XZ6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb4Q91XZ6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb4Q91XZ6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb4Q91XZ6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb4Q91XZ6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdhb4Q91XZ6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Pcdhb4Q91XZ6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb4Q91XZ6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Pcdhb4Q91XZ6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb4Q91XZ6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms