Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb4Q91XZ6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.99■■□□□ 1.59
Pcdhb4Q91XZ6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhb4Q91XZ6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb4Q91XZ6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb4Q91XZ6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Pcdhb4Q91XZ6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.95■■□□□ 1.59
Pcdhb4Q91XZ6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb4Q91XZ6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb4Q91XZ6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb4Q91XZ6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb4Q91XZ6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb4Q91XZ6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb4Q91XZ6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb4Q91XZ6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.91■■□□□ 1.58
Pcdhb4Q91XZ6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb4Q91XZ6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb4Q91XZ6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.9■■□□□ 1.58
Pcdhb4Q91XZ6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb4Q91XZ6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb4Q91XZ6 Peli2-204ENSMUST00000226513 1320 ntBASIC24.89■■□□□ 1.58
Pcdhb4Q91XZ6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Pcdhb4Q91XZ6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.57
Pcdhb4Q91XZ6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb4Q91XZ6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb4Q91XZ6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
Pcdhb4Q91XZ6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhb4Q91XZ6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Pcdhb4Q91XZ6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhb4Q91XZ6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhb4Q91XZ6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
Pcdhb4Q91XZ6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb4Q91XZ6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.83■■□□□ 1.57
Pcdhb4Q91XZ6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb4Q91XZ6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.82■■□□□ 1.56
Pcdhb4Q91XZ6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Pcdhb4Q91XZ6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb4Q91XZ6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb4Q91XZ6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb4Q91XZ6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Pcdhb4Q91XZ6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Pcdhb4Q91XZ6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb4Q91XZ6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Pcdhb4Q91XZ6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb4Q91XZ6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb4Q91XZ6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb4Q91XZ6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb4Q91XZ6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Pcdhb4Q91XZ6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
Pcdhb4Q91XZ6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Pcdhb4Q91XZ6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
Pcdhb4Q91XZ6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Pcdhb4Q91XZ6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb4Q91XZ6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Pcdhb4Q91XZ6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb4Q91XZ6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb4Q91XZ6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb4Q91XZ6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb4Q91XZ6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb4Q91XZ6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb4Q91XZ6 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.67■■□□□ 1.54
Pcdhb4Q91XZ6 Gm24804-201ENSMUST00000174982 85 ntBASIC24.66■■□□□ 1.54
Pcdhb4Q91XZ6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb4Q91XZ6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb4Q91XZ6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb4Q91XZ6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Pcdhb4Q91XZ6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb4Q91XZ6 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.64■■□□□ 1.53
Pcdhb4Q91XZ6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb4Q91XZ6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb4Q91XZ6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
Pcdhb4Q91XZ6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcdhb4Q91XZ6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb4Q91XZ6 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.62■■□□□ 1.53
Pcdhb4Q91XZ6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb4Q91XZ6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb4Q91XZ6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb4Q91XZ6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb4Q91XZ6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb4Q91XZ6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Pcdhb4Q91XZ6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb4Q91XZ6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb4Q91XZ6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb4Q91XZ6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.58■■□□□ 1.53
Pcdhb4Q91XZ6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb4Q91XZ6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb4Q91XZ6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb4Q91XZ6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb4Q91XZ6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb4Q91XZ6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb4Q91XZ6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdhb4Q91XZ6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Pcdhb4Q91XZ6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb4Q91XZ6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Pcdhb4Q91XZ6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb4Q91XZ6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms