Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhga4Q91XY4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhga4Q91XY4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhga4Q91XY4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhga4Q91XY4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhga4Q91XY4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.55■■□□□ 1.52
Pcdhga4Q91XY4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhga4Q91XY4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhga4Q91XY4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhga4Q91XY4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhga4Q91XY4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
Pcdhga4Q91XY4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.53■■□□□ 1.52
Pcdhga4Q91XY4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.52■■□□□ 1.52
Pcdhga4Q91XY4 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.51■■□□□ 1.51
Pcdhga4Q91XY4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga4Q91XY4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Pcdhga4Q91XY4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga4Q91XY4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhga4Q91XY4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Pcdhga4Q91XY4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga4Q91XY4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.43■■□□□ 1.5
Pcdhga4Q91XY4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Pcdhga4Q91XY4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Pcdhga4Q91XY4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhga4Q91XY4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhga4Q91XY4 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.38■■□□□ 1.49
Pcdhga4Q91XY4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhga4Q91XY4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhga4Q91XY4 Gm45855-201ENSMUST00000212546 880 ntBASIC24.38■■□□□ 1.49
Pcdhga4Q91XY4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhga4Q91XY4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Pcdhga4Q91XY4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Pcdhga4Q91XY4 Gm9397-201ENSMUST00000200125 605 ntBASIC24.35■■□□□ 1.49
Pcdhga4Q91XY4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhga4Q91XY4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhga4Q91XY4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.34■■□□□ 1.49
Pcdhga4Q91XY4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhga4Q91XY4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
Pcdhga4Q91XY4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.33■■□□□ 1.49
Pcdhga4Q91XY4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhga4Q91XY4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.32■■□□□ 1.48
Pcdhga4Q91XY4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhga4Q91XY4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.31■■□□□ 1.48
Pcdhga4Q91XY4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhga4Q91XY4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhga4Q91XY4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhga4Q91XY4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Pcdhga4Q91XY4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga4Q91XY4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhga4Q91XY4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhga4Q91XY4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhga4Q91XY4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhga4Q91XY4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Pcdhga4Q91XY4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Pcdhga4Q91XY4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhga4Q91XY4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhga4Q91XY4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhga4Q91XY4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga4Q91XY4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga4Q91XY4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.22■■□□□ 1.47
Pcdhga4Q91XY4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhga4Q91XY4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhga4Q91XY4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.21■■□□□ 1.47
Pcdhga4Q91XY4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.21■■□□□ 1.47
Pcdhga4Q91XY4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhga4Q91XY4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhga4Q91XY4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Pcdhga4Q91XY4 Gm24970-201ENSMUST00000175582 82 ntBASIC24.2■■□□□ 1.46
Pcdhga4Q91XY4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.2■■□□□ 1.46
Pcdhga4Q91XY4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhga4Q91XY4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhga4Q91XY4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhga4Q91XY4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhga4Q91XY4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhga4Q91XY4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.19■■□□□ 1.46
Pcdhga4Q91XY4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhga4Q91XY4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.17■■□□□ 1.46
Pcdhga4Q91XY4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Pcdhga4Q91XY4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhga4Q91XY4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhga4Q91XY4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhga4Q91XY4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.15■■□□□ 1.46
Pcdhga4Q91XY4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhga4Q91XY4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.12■■□□□ 1.45
Pcdhga4Q91XY4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Pcdhga4Q91XY4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhga4Q91XY4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhga4Q91XY4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhga4Q91XY4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhga4Q91XY4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhga4Q91XY4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhga4Q91XY4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga4Q91XY4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga4Q91XY4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga4Q91XY4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.1■■□□□ 1.45
Pcdhga4Q91XY4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga4Q91XY4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhga4Q91XY4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhga4Q91XY4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
Pcdhga4Q91XY4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms