Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Pcdhgb1Q91XX8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.47■■□□□ 1.83
Pcdhgb1Q91XX8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.46■■□□□ 1.83
Pcdhgb1Q91XX8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.46■■□□□ 1.83
Pcdhgb1Q91XX8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhgb1Q91XX8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Pcdhgb1Q91XX8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.45■■□□□ 1.82
Pcdhgb1Q91XX8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.45■■□□□ 1.82
Pcdhgb1Q91XX8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhgb1Q91XX8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.44■■□□□ 1.82
Pcdhgb1Q91XX8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Pcdhgb1Q91XX8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhgb1Q91XX8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.44■■□□□ 1.82
Pcdhgb1Q91XX8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhgb1Q91XX8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhgb1Q91XX8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.42■■□□□ 1.82
Pcdhgb1Q91XX8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhgb1Q91XX8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhgb1Q91XX8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhgb1Q91XX8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhgb1Q91XX8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhgb1Q91XX8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhgb1Q91XX8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdhgb1Q91XX8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Pcdhgb1Q91XX8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcdhgb1Q91XX8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhgb1Q91XX8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhgb1Q91XX8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhgb1Q91XX8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.36■■□□□ 1.81
Pcdhgb1Q91XX8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhgb1Q91XX8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhgb1Q91XX8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhgb1Q91XX8 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.34■■□□□ 1.81
Pcdhgb1Q91XX8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhgb1Q91XX8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcdhgb1Q91XX8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcdhgb1Q91XX8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
Pcdhgb1Q91XX8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Pcdhgb1Q91XX8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
Pcdhgb1Q91XX8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhgb1Q91XX8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.31■■□□□ 1.8
Pcdhgb1Q91XX8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhgb1Q91XX8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhgb1Q91XX8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhgb1Q91XX8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhgb1Q91XX8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhgb1Q91XX8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Pcdhgb1Q91XX8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Pcdhgb1Q91XX8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhgb1Q91XX8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.26■■□□□ 1.79
Pcdhgb1Q91XX8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.24■■□□□ 1.79
Pcdhgb1Q91XX8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhgb1Q91XX8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhgb1Q91XX8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhgb1Q91XX8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Pcdhgb1Q91XX8 Gm24970-201ENSMUST00000175582 82 ntBASIC26.19■■□□□ 1.78
Pcdhgb1Q91XX8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhgb1Q91XX8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.18■■□□□ 1.78
Pcdhgb1Q91XX8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhgb1Q91XX8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhgb1Q91XX8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Pcdhgb1Q91XX8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.17■■□□□ 1.78
Pcdhgb1Q91XX8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhgb1Q91XX8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhgb1Q91XX8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhgb1Q91XX8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhgb1Q91XX8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhgb1Q91XX8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.12■■□□□ 1.77
Pcdhgb1Q91XX8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhgb1Q91XX8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
Pcdhgb1Q91XX8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhgb1Q91XX8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhgb1Q91XX8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhgb1Q91XX8 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.09■■□□□ 1.77
Pcdhgb1Q91XX8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhgb1Q91XX8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhgb1Q91XX8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Pcdhgb1Q91XX8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhgb1Q91XX8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhgb1Q91XX8 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.06■■□□□ 1.76
Pcdhgb1Q91XX8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhgb1Q91XX8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Pcdhgb1Q91XX8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhgb1Q91XX8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhgb1Q91XX8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.02■■□□□ 1.76
Pcdhgb1Q91XX8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdhgb1Q91XX8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Pcdhgb1Q91XX8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhgb1Q91XX8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdhgb1Q91XX8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhgb1Q91XX8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.99■■□□□ 1.75
Pcdhgb1Q91XX8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdhgb1Q91XX8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhgb1Q91XX8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhgb1Q91XX8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhgb1Q91XX8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhgb1Q91XX8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhgb1Q91XX8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhgb1Q91XX8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhgb1Q91XX8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.92■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms