Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rfc3Q8R323 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.22■■□□□ 1.31
Rfc3Q8R323 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rfc3Q8R323 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rfc3Q8R323 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rfc3Q8R323 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rfc3Q8R323 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rfc3Q8R323 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rfc3Q8R323 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.17■■□□□ 1.3
Rfc3Q8R323 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.17■■□□□ 1.3
Rfc3Q8R323 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rfc3Q8R323 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rfc3Q8R323 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Rfc3Q8R323 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rfc3Q8R323 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.16■■□□□ 1.3
Rfc3Q8R323 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rfc3Q8R323 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rfc3Q8R323 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Rfc3Q8R323 Gm9397-201ENSMUST00000200125 605 ntBASIC23.15■■□□□ 1.3
Rfc3Q8R323 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rfc3Q8R323 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
Rfc3Q8R323 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.13■■□□□ 1.29
Rfc3Q8R323 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rfc3Q8R323 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rfc3Q8R323 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rfc3Q8R323 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rfc3Q8R323 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.12■■□□□ 1.29
Rfc3Q8R323 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rfc3Q8R323 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rfc3Q8R323 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rfc3Q8R323 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Rfc3Q8R323 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rfc3Q8R323 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rfc3Q8R323 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.09■■□□□ 1.29
Rfc3Q8R323 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.08■■□□□ 1.29
Rfc3Q8R323 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.08■■□□□ 1.29
Rfc3Q8R323 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Rfc3Q8R323 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Rfc3Q8R323 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc3Q8R323 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.06■■□□□ 1.28
Rfc3Q8R323 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfc3Q8R323 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
Rfc3Q8R323 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.05■■□□□ 1.28
Rfc3Q8R323 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.05■■□□□ 1.28
Rfc3Q8R323 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Rfc3Q8R323 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc3Q8R323 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc3Q8R323 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc3Q8R323 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rfc3Q8R323 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rfc3Q8R323 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfc3Q8R323 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rfc3Q8R323 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rfc3Q8R323 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rfc3Q8R323 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rfc3Q8R323 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23■■□□□ 1.27
Rfc3Q8R323 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rfc3Q8R323 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.99■■□□□ 1.27
Rfc3Q8R323 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rfc3Q8R323 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rfc3Q8R323 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rfc3Q8R323 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rfc3Q8R323 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rfc3Q8R323 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rfc3Q8R323 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Rfc3Q8R323 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rfc3Q8R323 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.94■■□□□ 1.26
Rfc3Q8R323 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rfc3Q8R323 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Rfc3Q8R323 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Rfc3Q8R323 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.92■■□□□ 1.26
Rfc3Q8R323 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rfc3Q8R323 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.92■■□□□ 1.26
Rfc3Q8R323 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rfc3Q8R323 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Rfc3Q8R323 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rfc3Q8R323 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rfc3Q8R323 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rfc3Q8R323 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Rfc3Q8R323 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.9■■□□□ 1.26
Rfc3Q8R323 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rfc3Q8R323 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rfc3Q8R323 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Rfc3Q8R323 Gm24970-201ENSMUST00000175582 82 ntBASIC22.87■■□□□ 1.25
Rfc3Q8R323 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rfc3Q8R323 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rfc3Q8R323 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rfc3Q8R323 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rfc3Q8R323 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rfc3Q8R323 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.81■■□□□ 1.24
Rfc3Q8R323 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rfc3Q8R323 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rfc3Q8R323 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Rfc3Q8R323 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rfc3Q8R323 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
Rfc3Q8R323 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.77■■□□□ 1.24
Rfc3Q8R323 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rfc3Q8R323 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Rfc3Q8R323 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.75■■□□□ 1.23
Rfc3Q8R323 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms