Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm6345-201ENSMUST00000180378 1691 ntBASIC30■■■□□ 2.39
Cchcr1Q8K2I2 Gm6206-201ENSMUST00000133472 2199 ntBASIC30■■■□□ 2.39
Cchcr1Q8K2I2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.99■■■□□ 2.39
Cchcr1Q8K2I2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Cchcr1Q8K2I2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Cchcr1Q8K2I2 Peli2-204ENSMUST00000226513 1320 ntBASIC29.97■■■□□ 2.39
Cchcr1Q8K2I2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Cchcr1Q8K2I2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Cchcr1Q8K2I2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cchcr1Q8K2I2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Cchcr1Q8K2I2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cchcr1Q8K2I2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cchcr1Q8K2I2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Cchcr1Q8K2I2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Cchcr1Q8K2I2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Cchcr1Q8K2I2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Cchcr1Q8K2I2 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.91■■■□□ 2.38
Cchcr1Q8K2I2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Cchcr1Q8K2I2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
Cchcr1Q8K2I2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Cchcr1Q8K2I2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Cchcr1Q8K2I2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Cchcr1Q8K2I2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Cchcr1Q8K2I2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Cchcr1Q8K2I2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Cchcr1Q8K2I2 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.84■■■□□ 2.37
Cchcr1Q8K2I2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Cchcr1Q8K2I2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Cchcr1Q8K2I2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cchcr1Q8K2I2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Cchcr1Q8K2I2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Cchcr1Q8K2I2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Cchcr1Q8K2I2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Cchcr1Q8K2I2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Cchcr1Q8K2I2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.75■■■□□ 2.35
Cchcr1Q8K2I2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Cchcr1Q8K2I2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.74■■■□□ 2.35
Cchcr1Q8K2I2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.73■■■□□ 2.35
Cchcr1Q8K2I2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Cchcr1Q8K2I2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Cchcr1Q8K2I2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Cchcr1Q8K2I2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Cchcr1Q8K2I2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Cchcr1Q8K2I2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
Cchcr1Q8K2I2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Cchcr1Q8K2I2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Cchcr1Q8K2I2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Cchcr1Q8K2I2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Cchcr1Q8K2I2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Cchcr1Q8K2I2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Cchcr1Q8K2I2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Cchcr1Q8K2I2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Cchcr1Q8K2I2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Cchcr1Q8K2I2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Cchcr1Q8K2I2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Cchcr1Q8K2I2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Cchcr1Q8K2I2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Cchcr1Q8K2I2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Cchcr1Q8K2I2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Cchcr1Q8K2I2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Cchcr1Q8K2I2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Cchcr1Q8K2I2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Cchcr1Q8K2I2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Cchcr1Q8K2I2 Gm24804-201ENSMUST00000174982 85 ntBASIC29.58■■■□□ 2.33
Cchcr1Q8K2I2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Cchcr1Q8K2I2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Cchcr1Q8K2I2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
Cchcr1Q8K2I2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Cchcr1Q8K2I2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.54■■■□□ 2.32
Cchcr1Q8K2I2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.52■■■□□ 2.32
Cchcr1Q8K2I2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Cchcr1Q8K2I2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Cchcr1Q8K2I2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.51■■■□□ 2.31
Cchcr1Q8K2I2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Cchcr1Q8K2I2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.49■■■□□ 2.31
Cchcr1Q8K2I2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
Cchcr1Q8K2I2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
Cchcr1Q8K2I2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.49■■■□□ 2.31
Cchcr1Q8K2I2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Cchcr1Q8K2I2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.49■■■□□ 2.31
Cchcr1Q8K2I2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Cchcr1Q8K2I2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
Cchcr1Q8K2I2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Cchcr1Q8K2I2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Cchcr1Q8K2I2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Cchcr1Q8K2I2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Cchcr1Q8K2I2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.4■■■□□ 2.3
Cchcr1Q8K2I2 Amer2-203ENSMUST00000225247 2662 ntBASIC29.39■■■□□ 2.3
Cchcr1Q8K2I2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Cchcr1Q8K2I2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Cchcr1Q8K2I2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cchcr1Q8K2I2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Cchcr1Q8K2I2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cchcr1Q8K2I2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Cchcr1Q8K2I2 Gm16148-201ENSMUST00000119653 893 ntBASIC29.35■■■□□ 2.29
Cchcr1Q8K2I2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cchcr1Q8K2I2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Cchcr1Q8K2I2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
Cchcr1Q8K2I2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Cchcr1Q8K2I2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms