Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.77■■■□□ 2.2
Zswim3Q8CFL8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Zswim3Q8CFL8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Zswim3Q8CFL8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Zswim3Q8CFL8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Zswim3Q8CFL8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Zswim3Q8CFL8 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.72■■■□□ 2.19
Zswim3Q8CFL8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Zswim3Q8CFL8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Zswim3Q8CFL8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.7■■■□□ 2.19
Zswim3Q8CFL8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
Zswim3Q8CFL8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Zswim3Q8CFL8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Zswim3Q8CFL8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.68■■■□□ 2.18
Zswim3Q8CFL8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Zswim3Q8CFL8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Zswim3Q8CFL8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Zswim3Q8CFL8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.63■■■□□ 2.17
Zswim3Q8CFL8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Zswim3Q8CFL8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
Zswim3Q8CFL8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Zswim3Q8CFL8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Zswim3Q8CFL8 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.56■■■□□ 2.16
Zswim3Q8CFL8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Zswim3Q8CFL8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Zswim3Q8CFL8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Zswim3Q8CFL8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Zswim3Q8CFL8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Zswim3Q8CFL8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Zswim3Q8CFL8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.51■■■□□ 2.15
Zswim3Q8CFL8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.49■■■□□ 2.15
Zswim3Q8CFL8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.48■■■□□ 2.15
Zswim3Q8CFL8 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.47■■■□□ 2.15
Zswim3Q8CFL8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Zswim3Q8CFL8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Zswim3Q8CFL8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Zswim3Q8CFL8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Zswim3Q8CFL8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Zswim3Q8CFL8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Zswim3Q8CFL8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Zswim3Q8CFL8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.43■■■□□ 2.14
Zswim3Q8CFL8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.42■■■□□ 2.14
Zswim3Q8CFL8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.41■■■□□ 2.14
Zswim3Q8CFL8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Zswim3Q8CFL8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Zswim3Q8CFL8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
Zswim3Q8CFL8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Zswim3Q8CFL8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Zswim3Q8CFL8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.38■■■□□ 2.13
Zswim3Q8CFL8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.34■■■□□ 2.13
Zswim3Q8CFL8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Zswim3Q8CFL8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.33■■■□□ 2.13
Zswim3Q8CFL8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.33■■■□□ 2.13
Zswim3Q8CFL8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Zswim3Q8CFL8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
Zswim3Q8CFL8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.32■■■□□ 2.12
Zswim3Q8CFL8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Zswim3Q8CFL8 Gm7432-201ENSMUST00000210343 879 ntBASIC28.31■■■□□ 2.12
Zswim3Q8CFL8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Zswim3Q8CFL8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Zswim3Q8CFL8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Zswim3Q8CFL8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Zswim3Q8CFL8 Nkain2-201ENSMUST00000092602 558 ntBASIC28.28■■■□□ 2.12
Zswim3Q8CFL8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Zswim3Q8CFL8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Zswim3Q8CFL8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Zswim3Q8CFL8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Zswim3Q8CFL8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Zswim3Q8CFL8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Zswim3Q8CFL8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Zswim3Q8CFL8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Zswim3Q8CFL8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Zswim3Q8CFL8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.18■■■□□ 2.1
Zswim3Q8CFL8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zswim3Q8CFL8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Zswim3Q8CFL8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Zswim3Q8CFL8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Zswim3Q8CFL8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Zswim3Q8CFL8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.15■■■□□ 2.1
Zswim3Q8CFL8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
Zswim3Q8CFL8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.14■■■□□ 2.1
Zswim3Q8CFL8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.14■■■□□ 2.1
Zswim3Q8CFL8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Zswim3Q8CFL8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Zswim3Q8CFL8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Zswim3Q8CFL8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Zswim3Q8CFL8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Zswim3Q8CFL8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
Zswim3Q8CFL8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Zswim3Q8CFL8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Zswim3Q8CFL8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Zswim3Q8CFL8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Zswim3Q8CFL8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.11■■■□□ 2.09
Zswim3Q8CFL8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Zswim3Q8CFL8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Zswim3Q8CFL8 Gm11599-201ENSMUST00000118720 878 ntBASIC28.07■■■□□ 2.08
Zswim3Q8CFL8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Zswim3Q8CFL8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Zswim3Q8CFL8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Zswim3Q8CFL8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms