Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smim4Q8C1Q6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Smim4Q8C1Q6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.04■□□□□ 0.96
Smim4Q8C1Q6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Smim4Q8C1Q6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Smim4Q8C1Q6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smim4Q8C1Q6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smim4Q8C1Q6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Smim4Q8C1Q6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Smim4Q8C1Q6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.01■□□□□ 0.95
Smim4Q8C1Q6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smim4Q8C1Q6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Smim4Q8C1Q6 Gm8109-201ENSMUST00000194076 746 ntBASIC21■□□□□ 0.95
Smim4Q8C1Q6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smim4Q8C1Q6 Gm6206-201ENSMUST00000133472 2199 ntBASIC21■□□□□ 0.95
Smim4Q8C1Q6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Smim4Q8C1Q6 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.97■□□□□ 0.95
Smim4Q8C1Q6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smim4Q8C1Q6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smim4Q8C1Q6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smim4Q8C1Q6 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.95■□□□□ 0.94
Smim4Q8C1Q6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smim4Q8C1Q6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smim4Q8C1Q6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Smim4Q8C1Q6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.93■□□□□ 0.94
Smim4Q8C1Q6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smim4Q8C1Q6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smim4Q8C1Q6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smim4Q8C1Q6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smim4Q8C1Q6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Smim4Q8C1Q6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smim4Q8C1Q6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim4Q8C1Q6 Peli2-204ENSMUST00000226513 1320 ntBASIC20.9■□□□□ 0.94
Smim4Q8C1Q6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim4Q8C1Q6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smim4Q8C1Q6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smim4Q8C1Q6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smim4Q8C1Q6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smim4Q8C1Q6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
Smim4Q8C1Q6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smim4Q8C1Q6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smim4Q8C1Q6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smim4Q8C1Q6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Smim4Q8C1Q6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smim4Q8C1Q6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smim4Q8C1Q6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smim4Q8C1Q6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smim4Q8C1Q6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smim4Q8C1Q6 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.82■□□□□ 0.92
Smim4Q8C1Q6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smim4Q8C1Q6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smim4Q8C1Q6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smim4Q8C1Q6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim4Q8C1Q6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim4Q8C1Q6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smim4Q8C1Q6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smim4Q8C1Q6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smim4Q8C1Q6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smim4Q8C1Q6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smim4Q8C1Q6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smim4Q8C1Q6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.77■□□□□ 0.92
Smim4Q8C1Q6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Smim4Q8C1Q6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smim4Q8C1Q6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smim4Q8C1Q6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smim4Q8C1Q6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smim4Q8C1Q6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smim4Q8C1Q6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smim4Q8C1Q6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smim4Q8C1Q6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smim4Q8C1Q6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smim4Q8C1Q6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smim4Q8C1Q6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smim4Q8C1Q6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smim4Q8C1Q6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smim4Q8C1Q6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smim4Q8C1Q6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smim4Q8C1Q6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smim4Q8C1Q6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smim4Q8C1Q6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smim4Q8C1Q6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smim4Q8C1Q6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.7■□□□□ 0.9
Smim4Q8C1Q6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Smim4Q8C1Q6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smim4Q8C1Q6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Smim4Q8C1Q6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.67■□□□□ 0.9
Smim4Q8C1Q6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smim4Q8C1Q6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smim4Q8C1Q6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.66■□□□□ 0.9
Smim4Q8C1Q6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smim4Q8C1Q6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.65■□□□□ 0.9
Smim4Q8C1Q6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smim4Q8C1Q6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smim4Q8C1Q6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smim4Q8C1Q6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smim4Q8C1Q6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.62■□□□□ 0.89
Smim4Q8C1Q6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smim4Q8C1Q6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smim4Q8C1Q6 Gm24804-201ENSMUST00000174982 85 ntBASIC20.6■□□□□ 0.89
Smim4Q8C1Q6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms