Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smg1Q8BKX6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Smg1Q8BKX6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.32■■□□□ 1.16
Smg1Q8BKX6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
Smg1Q8BKX6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smg1Q8BKX6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.3■■□□□ 1.16
Smg1Q8BKX6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Smg1Q8BKX6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Smg1Q8BKX6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Smg1Q8BKX6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Smg1Q8BKX6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.27■■□□□ 1.16
Smg1Q8BKX6 Mipep-204ENSMUST00000225043 1548 ntBASIC22.26■■□□□ 1.15
Smg1Q8BKX6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.25■■□□□ 1.15
Smg1Q8BKX6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Smg1Q8BKX6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Smg1Q8BKX6 Gm7432-201ENSMUST00000210343 879 ntBASIC22.22■■□□□ 1.15
Smg1Q8BKX6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smg1Q8BKX6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smg1Q8BKX6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smg1Q8BKX6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smg1Q8BKX6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Smg1Q8BKX6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Smg1Q8BKX6 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.17■■□□□ 1.14
Smg1Q8BKX6 Gm11175-201ENSMUST00000116172 543 ntBASIC22.16■■□□□ 1.14
Smg1Q8BKX6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smg1Q8BKX6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smg1Q8BKX6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smg1Q8BKX6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Smg1Q8BKX6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Smg1Q8BKX6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Smg1Q8BKX6 Cap2-205ENSMUST00000225824 1634 ntBASIC22.12■■□□□ 1.13
Smg1Q8BKX6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
Smg1Q8BKX6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smg1Q8BKX6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smg1Q8BKX6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smg1Q8BKX6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Smg1Q8BKX6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Smg1Q8BKX6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.07■■□□□ 1.12
Smg1Q8BKX6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Smg1Q8BKX6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smg1Q8BKX6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Smg1Q8BKX6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
Smg1Q8BKX6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smg1Q8BKX6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smg1Q8BKX6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.05■■□□□ 1.12
Smg1Q8BKX6 Gm15039-201ENSMUST00000118914 875 ntBASIC22.05■■□□□ 1.12
Smg1Q8BKX6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.05■■□□□ 1.12
Smg1Q8BKX6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smg1Q8BKX6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Smg1Q8BKX6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Smg1Q8BKX6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.02■■□□□ 1.12
Smg1Q8BKX6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.02■■□□□ 1.12
Smg1Q8BKX6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Smg1Q8BKX6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smg1Q8BKX6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smg1Q8BKX6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22■■□□□ 1.11
Smg1Q8BKX6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smg1Q8BKX6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smg1Q8BKX6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smg1Q8BKX6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.97■■□□□ 1.11
Smg1Q8BKX6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smg1Q8BKX6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smg1Q8BKX6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smg1Q8BKX6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smg1Q8BKX6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smg1Q8BKX6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Gm11599-201ENSMUST00000118720 878 ntBASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.92■■□□□ 1.1
Smg1Q8BKX6 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.91■■□□□ 1.1
Smg1Q8BKX6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smg1Q8BKX6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smg1Q8BKX6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smg1Q8BKX6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smg1Q8BKX6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smg1Q8BKX6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smg1Q8BKX6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Smg1Q8BKX6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Smg1Q8BKX6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smg1Q8BKX6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smg1Q8BKX6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smg1Q8BKX6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smg1Q8BKX6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smg1Q8BKX6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smg1Q8BKX6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smg1Q8BKX6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Smg1Q8BKX6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smg1Q8BKX6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smg1Q8BKX6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Smg1Q8BKX6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smg1Q8BKX6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.8■■□□□ 1.08
Smg1Q8BKX6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.79■■□□□ 1.08
Smg1Q8BKX6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smg1Q8BKX6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smg1Q8BKX6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smg1Q8BKX6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smg1Q8BKX6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms