Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Kdm1aQ6ZQ88 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Kdm1aQ6ZQ88 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Kdm1aQ6ZQ88 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Kdm1aQ6ZQ88 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Kdm1aQ6ZQ88 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
Kdm1aQ6ZQ88 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
Kdm1aQ6ZQ88 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Kdm1aQ6ZQ88 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Kdm1aQ6ZQ88 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.02■■■□□ 2.08
Kdm1aQ6ZQ88 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Kdm1aQ6ZQ88 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28■■■□□ 2.07
Kdm1aQ6ZQ88 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.99■■■□□ 2.07
Kdm1aQ6ZQ88 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm1aQ6ZQ88 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm1aQ6ZQ88 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm1aQ6ZQ88 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm1aQ6ZQ88 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.97■■■□□ 2.07
Kdm1aQ6ZQ88 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Kdm1aQ6ZQ88 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
Kdm1aQ6ZQ88 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Kdm1aQ6ZQ88 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Kdm1aQ6ZQ88 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Kdm1aQ6ZQ88 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm1aQ6ZQ88 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.9■■■□□ 2.06
Kdm1aQ6ZQ88 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.9■■■□□ 2.06
Kdm1aQ6ZQ88 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.05
Kdm1aQ6ZQ88 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Kdm1aQ6ZQ88 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.85■■■□□ 2.05
Kdm1aQ6ZQ88 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Kdm1aQ6ZQ88 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Kdm1aQ6ZQ88 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Kdm1aQ6ZQ88 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Kdm1aQ6ZQ88 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Kdm1aQ6ZQ88 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm1aQ6ZQ88 Gm24804-201ENSMUST00000174982 85 ntBASIC27.83■■■□□ 2.05
Kdm1aQ6ZQ88 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm1aQ6ZQ88 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm1aQ6ZQ88 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Kdm1aQ6ZQ88 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.82■■■□□ 2.04
Kdm1aQ6ZQ88 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Kdm1aQ6ZQ88 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm1aQ6ZQ88 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm1aQ6ZQ88 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm1aQ6ZQ88 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Kdm1aQ6ZQ88 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Kdm1aQ6ZQ88 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Kdm1aQ6ZQ88 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm1aQ6ZQ88 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Kdm1aQ6ZQ88 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Kdm1aQ6ZQ88 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm1aQ6ZQ88 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Kdm1aQ6ZQ88 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Kdm1aQ6ZQ88 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Kdm1aQ6ZQ88 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Kdm1aQ6ZQ88 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Kdm1aQ6ZQ88 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Kdm1aQ6ZQ88 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Kdm1aQ6ZQ88 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Kdm1aQ6ZQ88 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Kdm1aQ6ZQ88 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.68■■■□□ 2.02
Kdm1aQ6ZQ88 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm1aQ6ZQ88 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm1aQ6ZQ88 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Kdm1aQ6ZQ88 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Kdm1aQ6ZQ88 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Kdm1aQ6ZQ88 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Kdm1aQ6ZQ88 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Kdm1aQ6ZQ88 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Kdm1aQ6ZQ88 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Kdm1aQ6ZQ88 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.58■■■□□ 2.01
Kdm1aQ6ZQ88 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
Kdm1aQ6ZQ88 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.57■■■□□ 2
Kdm1aQ6ZQ88 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.57■■■□□ 2
Kdm1aQ6ZQ88 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.57■■■□□ 2
Kdm1aQ6ZQ88 Gm16148-201ENSMUST00000119653 893 ntBASIC27.57■■■□□ 2
Kdm1aQ6ZQ88 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Kdm1aQ6ZQ88 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.57■■■□□ 2
Kdm1aQ6ZQ88 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.56■■■□□ 2
Kdm1aQ6ZQ88 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.56■■■□□ 2
Kdm1aQ6ZQ88 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.55■■■□□ 2
Kdm1aQ6ZQ88 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.53■■■□□ 2
Kdm1aQ6ZQ88 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.53■■■□□ 2
Kdm1aQ6ZQ88 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.52■■■□□ 2
Kdm1aQ6ZQ88 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm1aQ6ZQ88 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.52■■■□□ 2
Kdm1aQ6ZQ88 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Kdm1aQ6ZQ88 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Kdm1aQ6ZQ88 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.49■■□□□ 1.99
Kdm1aQ6ZQ88 Amer2-203ENSMUST00000225247 2662 ntBASIC27.48■■□□□ 1.99
Kdm1aQ6ZQ88 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Kdm1aQ6ZQ88 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Kdm1aQ6ZQ88 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Kdm1aQ6ZQ88 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Kdm1aQ6ZQ88 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Kdm1aQ6ZQ88 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Kdm1aQ6ZQ88 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Kdm1aQ6ZQ88 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Kdm1aQ6ZQ88 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Kdm1aQ6ZQ88 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.41■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms