Protein–RNA interactions for Protein: Q62521

Zic3, Zinc finger protein ZIC 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic3Q62521 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Zic3Q62521 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zic3Q62521 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zic3Q62521 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Zic3Q62521 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.37■■□□□ 1.01
Zic3Q62521 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zic3Q62521 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Zic3Q62521 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zic3Q62521 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zic3Q62521 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
Zic3Q62521 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zic3Q62521 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Zic3Q62521 Gm16148-201ENSMUST00000119653 893 ntBASIC21.34■■□□□ 1.01
Zic3Q62521 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.34■■□□□ 1.01
Zic3Q62521 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Zic3Q62521 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Zic3Q62521 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Zic3Q62521 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.31■■□□□ 1
Zic3Q62521 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zic3Q62521 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zic3Q62521 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zic3Q62521 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.28■■□□□ 1
Zic3Q62521 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zic3Q62521 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Zic3Q62521 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.26■□□□□ 0.99
Zic3Q62521 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Zic3Q62521 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Zic3Q62521 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zic3Q62521 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zic3Q62521 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zic3Q62521 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Zic3Q62521 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Zic3Q62521 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zic3Q62521 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zic3Q62521 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zic3Q62521 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zic3Q62521 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zic3Q62521 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zic3Q62521 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.18■□□□□ 0.98
Zic3Q62521 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zic3Q62521 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zic3Q62521 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Zic3Q62521 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zic3Q62521 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.15■□□□□ 0.98
Zic3Q62521 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zic3Q62521 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zic3Q62521 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Zic3Q62521 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zic3Q62521 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zic3Q62521 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zic3Q62521 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Zic3Q62521 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Zic3Q62521 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zic3Q62521 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zic3Q62521 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zic3Q62521 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Zic3Q62521 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zic3Q62521 Zxda-201ENSMUST00000117281 2621 ntBASIC21.09■□□□□ 0.97
Zic3Q62521 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Zic3Q62521 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zic3Q62521 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Zic3Q62521 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Zic3Q62521 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Zic3Q62521 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zic3Q62521 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zic3Q62521 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zic3Q62521 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Zic3Q62521 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zic3Q62521 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Zic3Q62521 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zic3Q62521 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.03■□□□□ 0.96
Zic3Q62521 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zic3Q62521 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Zic3Q62521 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zic3Q62521 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zic3Q62521 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21■□□□□ 0.95
Zic3Q62521 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zic3Q62521 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Zic3Q62521 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Zic3Q62521 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zic3Q62521 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zic3Q62521 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zic3Q62521 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Zic3Q62521 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Zic3Q62521 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.96■□□□□ 0.95
Zic3Q62521 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Zic3Q62521 Zfp131-205ENSMUST00000223812 663 ntBASIC20.95■□□□□ 0.94
Zic3Q62521 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.94■□□□□ 0.94
Zic3Q62521 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.94■□□□□ 0.94
Zic3Q62521 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Zic3Q62521 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Zic3Q62521 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Zic3Q62521 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zic3Q62521 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Zic3Q62521 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Zic3Q62521 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Zic3Q62521 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Zic3Q62521 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Zic3Q62521 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.9■□□□□ 0.94
Zic3Q62521 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms