Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.67■■□□□ 1.06
Hes3Q61657 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.65■■□□□ 1.06
Hes3Q61657 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hes3Q61657 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hes3Q61657 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hes3Q61657 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Hes3Q61657 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hes3Q61657 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hes3Q61657 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.61■■□□□ 1.05
Hes3Q61657 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hes3Q61657 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hes3Q61657 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Hes3Q61657 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hes3Q61657 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hes3Q61657 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hes3Q61657 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hes3Q61657 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hes3Q61657 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.57■■□□□ 1.04
Hes3Q61657 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hes3Q61657 Amer2-203ENSMUST00000225247 2662 ntBASIC21.56■■□□□ 1.04
Hes3Q61657 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
Hes3Q61657 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hes3Q61657 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hes3Q61657 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
Hes3Q61657 Peli2-204ENSMUST00000226513 1320 ntBASIC21.55■■□□□ 1.04
Hes3Q61657 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hes3Q61657 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hes3Q61657 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hes3Q61657 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hes3Q61657 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hes3Q61657 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Hes3Q61657 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hes3Q61657 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.51■■□□□ 1.03
Hes3Q61657 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hes3Q61657 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hes3Q61657 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Hes3Q61657 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hes3Q61657 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hes3Q61657 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hes3Q61657 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.48■■□□□ 1.03
Hes3Q61657 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hes3Q61657 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hes3Q61657 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hes3Q61657 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Hes3Q61657 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.46■■□□□ 1.03
Hes3Q61657 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hes3Q61657 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Hes3Q61657 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hes3Q61657 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hes3Q61657 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Hes3Q61657 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hes3Q61657 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.44■■□□□ 1.02
Hes3Q61657 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hes3Q61657 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.43■■□□□ 1.02
Hes3Q61657 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hes3Q61657 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hes3Q61657 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hes3Q61657 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hes3Q61657 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Hes3Q61657 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.39■■□□□ 1.01
Hes3Q61657 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hes3Q61657 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hes3Q61657 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hes3Q61657 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hes3Q61657 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hes3Q61657 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hes3Q61657 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hes3Q61657 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hes3Q61657 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hes3Q61657 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hes3Q61657 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Hes3Q61657 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hes3Q61657 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hes3Q61657 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hes3Q61657 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Hes3Q61657 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hes3Q61657 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hes3Q61657 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Hes3Q61657 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hes3Q61657 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hes3Q61657 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hes3Q61657 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hes3Q61657 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hes3Q61657 Gm24804-201ENSMUST00000174982 85 ntBASIC21.28■■□□□ 1
Hes3Q61657 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.27■■□□□ 1
Hes3Q61657 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hes3Q61657 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Hes3Q61657 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hes3Q61657 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hes3Q61657 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hes3Q61657 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hes3Q61657 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hes3Q61657 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hes3Q61657 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Hes3Q61657 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hes3Q61657 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hes3Q61657 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hes3Q61657 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hes3Q61657 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Hes3Q61657 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms