Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Six4Q61321 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.96■■□□□ 1.75
Six4Q61321 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Six4Q61321 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Six4Q61321 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Six4Q61321 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Six4Q61321 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Six4Q61321 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Six4Q61321 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.93■■□□□ 1.74
Six4Q61321 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.91■■□□□ 1.74
Six4Q61321 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Six4Q61321 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Six4Q61321 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.9■■□□□ 1.74
Six4Q61321 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Six4Q61321 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Six4Q61321 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Six4Q61321 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Six4Q61321 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Six4Q61321 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Six4Q61321 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
Six4Q61321 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.83■■□□□ 1.73
Six4Q61321 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.82■■□□□ 1.72
Six4Q61321 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Six4Q61321 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Six4Q61321 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Six4Q61321 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Six4Q61321 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Six4Q61321 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Six4Q61321 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Six4Q61321 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Six4Q61321 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Six4Q61321 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Six4Q61321 Zfp131-205ENSMUST00000223812 663 ntBASIC25.75■■□□□ 1.71
Six4Q61321 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Six4Q61321 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Six4Q61321 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Six4Q61321 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Six4Q61321 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Six4Q61321 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Six4Q61321 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Six4Q61321 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Six4Q61321 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.71■■□□□ 1.71
Six4Q61321 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Six4Q61321 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
Six4Q61321 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Six4Q61321 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Six4Q61321 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Six4Q61321 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.67■■□□□ 1.7
Six4Q61321 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Six4Q61321 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Six4Q61321 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Six4Q61321 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Six4Q61321 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Six4Q61321 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
Six4Q61321 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Six4Q61321 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Six4Q61321 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Six4Q61321 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Six4Q61321 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.59■■□□□ 1.69
Six4Q61321 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.58■■□□□ 1.68
Six4Q61321 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.57■■□□□ 1.68
Six4Q61321 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
Six4Q61321 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Six4Q61321 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Six4Q61321 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Six4Q61321 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Six4Q61321 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Six4Q61321 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Six4Q61321 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Six4Q61321 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Six4Q61321 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Six4Q61321 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.52■■□□□ 1.68
Six4Q61321 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Six4Q61321 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Six4Q61321 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Six4Q61321 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Six4Q61321 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Six4Q61321 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Six4Q61321 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Six4Q61321 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Six4Q61321 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Six4Q61321 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Six4Q61321 Zxda-201ENSMUST00000117281 2621 ntBASIC25.46■■□□□ 1.67
Six4Q61321 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Six4Q61321 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Six4Q61321 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Six4Q61321 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.43■■□□□ 1.66
Six4Q61321 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Six4Q61321 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Six4Q61321 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Six4Q61321 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.39■■□□□ 1.66
Six4Q61321 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Six4Q61321 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Six4Q61321 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.37■■□□□ 1.65
Six4Q61321 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Six4Q61321 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.37■■□□□ 1.65
Six4Q61321 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Six4Q61321 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Six4Q61321 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Six4Q61321 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms