Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Chrna5Q2MKA5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Chrna5Q2MKA5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Chrna5Q2MKA5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Chrna5Q2MKA5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Chrna5Q2MKA5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.34■■■□□ 2.61
Chrna5Q2MKA5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Chrna5Q2MKA5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Chrna5Q2MKA5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Chrna5Q2MKA5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
Chrna5Q2MKA5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Chrna5Q2MKA5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Chrna5Q2MKA5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Chrna5Q2MKA5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Chrna5Q2MKA5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.31■■■□□ 2.6
Chrna5Q2MKA5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Chrna5Q2MKA5 Gm8503-201ENSMUST00000118131 455 ntBASIC31.29■■■□□ 2.6
Chrna5Q2MKA5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Chrna5Q2MKA5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Chrna5Q2MKA5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.27■■■□□ 2.6
Chrna5Q2MKA5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chrna5Q2MKA5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chrna5Q2MKA5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chrna5Q2MKA5 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.23■■■□□ 2.59
Chrna5Q2MKA5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.23■■■□□ 2.59
Chrna5Q2MKA5 Gm6821-201ENSMUST00000107540 542 ntBASIC31.22■■■□□ 2.59
Chrna5Q2MKA5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.2■■■□□ 2.59
Chrna5Q2MKA5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Chrna5Q2MKA5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Chrna5Q2MKA5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Chrna5Q2MKA5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Chrna5Q2MKA5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Chrna5Q2MKA5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Chrna5Q2MKA5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Chrna5Q2MKA5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
Chrna5Q2MKA5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Chrna5Q2MKA5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chrna5Q2MKA5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Chrna5Q2MKA5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
Chrna5Q2MKA5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.11■■■□□ 2.57
Chrna5Q2MKA5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Chrna5Q2MKA5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Chrna5Q2MKA5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Chrna5Q2MKA5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chrna5Q2MKA5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.08■■■□□ 2.57
Chrna5Q2MKA5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Chrna5Q2MKA5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.04■■■□□ 2.56
Chrna5Q2MKA5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Chrna5Q2MKA5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Chrna5Q2MKA5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.01■■■□□ 2.55
Chrna5Q2MKA5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Chrna5Q2MKA5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
Chrna5Q2MKA5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Chrna5Q2MKA5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Chrna5Q2MKA5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Chrna5Q2MKA5 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.94■■■□□ 2.54
Chrna5Q2MKA5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Chrna5Q2MKA5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Chrna5Q2MKA5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Chrna5Q2MKA5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
Chrna5Q2MKA5 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.89■■■□□ 2.54
Chrna5Q2MKA5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Chrna5Q2MKA5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.88■■■□□ 2.53
Chrna5Q2MKA5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.88■■■□□ 2.53
Chrna5Q2MKA5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Chrna5Q2MKA5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Chrna5Q2MKA5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Chrna5Q2MKA5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Chrna5Q2MKA5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Chrna5Q2MKA5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Chrna5Q2MKA5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
Chrna5Q2MKA5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Chrna5Q2MKA5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.84■■■□□ 2.53
Chrna5Q2MKA5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Chrna5Q2MKA5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Chrna5Q2MKA5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.53
Chrna5Q2MKA5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Chrna5Q2MKA5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Chrna5Q2MKA5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Chrna5Q2MKA5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Chrna5Q2MKA5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Chrna5Q2MKA5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.74■■■□□ 2.51
Chrna5Q2MKA5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.73■■■□□ 2.51
Chrna5Q2MKA5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
Chrna5Q2MKA5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Chrna5Q2MKA5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
Chrna5Q2MKA5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Chrna5Q2MKA5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
Chrna5Q2MKA5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Chrna5Q2MKA5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Chrna5Q2MKA5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Chrna5Q2MKA5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Chrna5Q2MKA5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.66■■■□□ 2.5
Chrna5Q2MKA5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Chrna5Q2MKA5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Chrna5Q2MKA5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Chrna5Q2MKA5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Chrna5Q2MKA5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.64■■■□□ 2.5
Chrna5Q2MKA5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.64■■■□□ 2.5
Chrna5Q2MKA5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.64■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms