Protein–RNA interactions for Protein: P09240

Cck, Cholecystokinin, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckP09240 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CckP09240 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CckP09240 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CckP09240 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CckP09240 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CckP09240 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.39■□□□□ 0.37
CckP09240 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CckP09240 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.38■□□□□ 0.37
CckP09240 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CckP09240 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CckP09240 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CckP09240 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CckP09240 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CckP09240 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.37■□□□□ 0.37
CckP09240 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CckP09240 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CckP09240 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CckP09240 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CckP09240 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CckP09240 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CckP09240 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CckP09240 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CckP09240 Gm24109-201ENSMUST00000175489 103 ntBASIC17.33■□□□□ 0.36
CckP09240 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CckP09240 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CckP09240 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CckP09240 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CckP09240 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CckP09240 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CckP09240 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CckP09240 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.28■□□□□ 0.36
CckP09240 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CckP09240 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CckP09240 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.27■□□□□ 0.36
CckP09240 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.27■□□□□ 0.35
CckP09240 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CckP09240 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CckP09240 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CckP09240 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CckP09240 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CckP09240 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.24■□□□□ 0.35
CckP09240 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CckP09240 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CckP09240 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CckP09240 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.22■□□□□ 0.35
CckP09240 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CckP09240 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CckP09240 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CckP09240 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CckP09240 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CckP09240 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CckP09240 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CckP09240 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CckP09240 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CckP09240 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CckP09240 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.17■□□□□ 0.34
CckP09240 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CckP09240 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CckP09240 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CckP09240 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CckP09240 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CckP09240 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CckP09240 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CckP09240 Gm23366-201ENSMUST00000175022 89 ntBASIC17.15■□□□□ 0.34
CckP09240 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CckP09240 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CckP09240 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CckP09240 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CckP09240 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CckP09240 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CckP09240 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CckP09240 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CckP09240 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CckP09240 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CckP09240 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CckP09240 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CckP09240 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CckP09240 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CckP09240 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CckP09240 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CckP09240 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CckP09240 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CckP09240 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CckP09240 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CckP09240 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CckP09240 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CckP09240 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CckP09240 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CckP09240 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CckP09240 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.03■□□□□ 0.32
CckP09240 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CckP09240 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CckP09240 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CckP09240 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CckP09240 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CckP09240 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CckP09240 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CckP09240 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CckP09240 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CckP09240 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms