Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01739 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01739 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01739 Zxda-201ENSMUST00000117281 2621 ntBASIC18.95■□□□□ 0.62
P01739 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01739 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
P01739 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01739 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.93■□□□□ 0.62
P01739 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01739 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
P01739 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
P01739 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
P01739 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01739 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
P01739 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01739 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.9■□□□□ 0.62
P01739 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
P01739 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.89■□□□□ 0.61
P01739 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01739 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01739 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01739 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
P01739 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01739 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01739 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.86■□□□□ 0.61
P01739 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01739 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01739 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
P01739 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01739 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01739 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.83■□□□□ 0.61
P01739 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01739 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.82■□□□□ 0.6
P01739 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
P01739 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01739 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01739 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01739 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
P01739 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01739 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01739 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01739 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01739 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01739 Gm24804-201ENSMUST00000174982 85 ntBASIC18.78■□□□□ 0.6
P01739 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01739 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01739 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.78■□□□□ 0.6
P01739 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P01739 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01739 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
P01739 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P01739 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
P01739 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01739 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01739 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
P01739 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01739 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
P01739 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01739 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01739 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01739 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01739 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01739 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
P01739 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01739 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01739 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01739 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.69■□□□□ 0.58
P01739 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
P01739 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01739 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01739 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
P01739 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01739 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01739 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01739 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01739 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P01739 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01739 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01739 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P01739 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
P01739 Gm16148-201ENSMUST00000119653 893 ntBASIC18.62■□□□□ 0.57
P01739 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01739 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01739 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.61■□□□□ 0.57
P01739 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P01739 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
P01739 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.61■□□□□ 0.57
P01739 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P01739 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P01739 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.59■□□□□ 0.57
P01739 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
P01739 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P01739 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.58■□□□□ 0.57
P01739 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.57■□□□□ 0.56
P01739 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01739 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P01739 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P01739 Amer2-203ENSMUST00000225247 2662 ntBASIC18.56■□□□□ 0.56
P01739 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01739 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms