Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.23■■□□□ 1.79
Shoc2O88520 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Shoc2O88520 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shoc2O88520 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
Shoc2O88520 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shoc2O88520 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Shoc2O88520 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shoc2O88520 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Shoc2O88520 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shoc2O88520 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Shoc2O88520 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.12■■□□□ 1.77
Shoc2O88520 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shoc2O88520 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shoc2O88520 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Shoc2O88520 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Shoc2O88520 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Shoc2O88520 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.11■■□□□ 1.77
Shoc2O88520 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Shoc2O88520 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Shoc2O88520 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Shoc2O88520 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Shoc2O88520 Gm16148-201ENSMUST00000119653 893 ntBASIC26.03■■□□□ 1.76
Shoc2O88520 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shoc2O88520 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Shoc2O88520 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Shoc2O88520 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26■■□□□ 1.75
Shoc2O88520 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Shoc2O88520 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Shoc2O88520 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.97■■□□□ 1.75
Shoc2O88520 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Shoc2O88520 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Shoc2O88520 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Shoc2O88520 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Shoc2O88520 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Shoc2O88520 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.95■■□□□ 1.74
Shoc2O88520 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Shoc2O88520 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
Shoc2O88520 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
Shoc2O88520 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.92■■□□□ 1.74
Shoc2O88520 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Shoc2O88520 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Shoc2O88520 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Shoc2O88520 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shoc2O88520 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shoc2O88520 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Shoc2O88520 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shoc2O88520 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Shoc2O88520 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.88■■□□□ 1.73
Shoc2O88520 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Shoc2O88520 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Shoc2O88520 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Shoc2O88520 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
Shoc2O88520 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Shoc2O88520 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.85■■□□□ 1.73
Shoc2O88520 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shoc2O88520 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Shoc2O88520 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Shoc2O88520 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Shoc2O88520 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Shoc2O88520 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Shoc2O88520 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Shoc2O88520 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Shoc2O88520 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Shoc2O88520 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Shoc2O88520 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Shoc2O88520 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Shoc2O88520 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Shoc2O88520 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Shoc2O88520 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Shoc2O88520 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Shoc2O88520 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.78■■□□□ 1.72
Shoc2O88520 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
Shoc2O88520 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
Shoc2O88520 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Shoc2O88520 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Shoc2O88520 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Shoc2O88520 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Shoc2O88520 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.74■■□□□ 1.71
Shoc2O88520 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.74■■□□□ 1.71
Shoc2O88520 Zfp131-205ENSMUST00000223812 663 ntBASIC25.74■■□□□ 1.71
Shoc2O88520 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Shoc2O88520 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Shoc2O88520 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shoc2O88520 Amer2-203ENSMUST00000225247 2662 ntBASIC25.7■■□□□ 1.7
Shoc2O88520 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Shoc2O88520 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Shoc2O88520 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.7■■□□□ 1.7
Shoc2O88520 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Shoc2O88520 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Shoc2O88520 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Shoc2O88520 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shoc2O88520 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shoc2O88520 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.66■■□□□ 1.7
Shoc2O88520 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Shoc2O88520 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shoc2O88520 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Shoc2O88520 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shoc2O88520 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shoc2O88520 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shoc2O88520 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms