Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Kcnu1O54982 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Kcnu1O54982 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Kcnu1O54982 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Kcnu1O54982 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Kcnu1O54982 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Kcnu1O54982 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
Kcnu1O54982 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Kcnu1O54982 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.2■■□□□ 1.94
Kcnu1O54982 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.2■■□□□ 1.94
Kcnu1O54982 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Kcnu1O54982 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Kcnu1O54982 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.18■■□□□ 1.94
Kcnu1O54982 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Kcnu1O54982 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Kcnu1O54982 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Kcnu1O54982 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.14■■□□□ 1.94
Kcnu1O54982 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Kcnu1O54982 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Kcnu1O54982 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.1■■□□□ 1.93
Kcnu1O54982 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Kcnu1O54982 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.08■■□□□ 1.93
Kcnu1O54982 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Kcnu1O54982 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Kcnu1O54982 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
Kcnu1O54982 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Kcnu1O54982 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Kcnu1O54982 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Kcnu1O54982 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Kcnu1O54982 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Kcnu1O54982 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Kcnu1O54982 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Kcnu1O54982 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Kcnu1O54982 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Kcnu1O54982 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Kcnu1O54982 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Kcnu1O54982 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Kcnu1O54982 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Kcnu1O54982 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Kcnu1O54982 Gm24804-201ENSMUST00000174982 85 ntBASIC26.95■■□□□ 1.9
Kcnu1O54982 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Kcnu1O54982 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Kcnu1O54982 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Kcnu1O54982 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Kcnu1O54982 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Kcnu1O54982 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Kcnu1O54982 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Kcnu1O54982 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Kcnu1O54982 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Kcnu1O54982 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
Kcnu1O54982 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Kcnu1O54982 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Kcnu1O54982 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Kcnu1O54982 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Kcnu1O54982 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Kcnu1O54982 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Kcnu1O54982 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Kcnu1O54982 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Kcnu1O54982 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.86■■□□□ 1.89
Kcnu1O54982 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Kcnu1O54982 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.85■■□□□ 1.89
Kcnu1O54982 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Kcnu1O54982 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Kcnu1O54982 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Kcnu1O54982 Amer2-203ENSMUST00000225247 2662 ntBASIC26.84■■□□□ 1.89
Kcnu1O54982 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Kcnu1O54982 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
Kcnu1O54982 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Kcnu1O54982 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Kcnu1O54982 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.8■■□□□ 1.88
Kcnu1O54982 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Kcnu1O54982 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.79■■□□□ 1.88
Kcnu1O54982 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.78■■□□□ 1.88
Kcnu1O54982 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Kcnu1O54982 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Kcnu1O54982 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Kcnu1O54982 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Kcnu1O54982 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Kcnu1O54982 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Kcnu1O54982 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Kcnu1O54982 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.7■■□□□ 1.87
Kcnu1O54982 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Kcnu1O54982 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Kcnu1O54982 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Kcnu1O54982 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Kcnu1O54982 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Kcnu1O54982 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Kcnu1O54982 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Kcnu1O54982 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Kcnu1O54982 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Kcnu1O54982 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Kcnu1O54982 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Kcnu1O54982 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Kcnu1O54982 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Kcnu1O54982 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Kcnu1O54982 Gm16148-201ENSMUST00000119653 893 ntBASIC26.63■■□□□ 1.85
Kcnu1O54982 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Kcnu1O54982 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.63■■□□□ 1.85
Kcnu1O54982 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Kcnu1O54982 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms