Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Tnfrsf11bO08712 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Tnfrsf11bO08712 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.82■■□□□ 1.72
Tnfrsf11bO08712 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
Tnfrsf11bO08712 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.78■■□□□ 1.72
Tnfrsf11bO08712 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Tnfrsf11bO08712 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.78■■□□□ 1.72
Tnfrsf11bO08712 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.77■■□□□ 1.72
Tnfrsf11bO08712 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.75■■□□□ 1.71
Tnfrsf11bO08712 Peli2-204ENSMUST00000226513 1320 ntBASIC25.75■■□□□ 1.71
Tnfrsf11bO08712 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Tnfrsf11bO08712 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Tnfrsf11bO08712 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Tnfrsf11bO08712 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Tnfrsf11bO08712 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Tnfrsf11bO08712 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Tnfrsf11bO08712 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Tnfrsf11bO08712 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Tnfrsf11bO08712 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Tnfrsf11bO08712 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Tnfrsf11bO08712 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Tnfrsf11bO08712 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Tnfrsf11bO08712 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Tnfrsf11bO08712 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Tnfrsf11bO08712 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Tnfrsf11bO08712 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.67■■□□□ 1.7
Tnfrsf11bO08712 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Tnfrsf11bO08712 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tnfrsf11bO08712 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tnfrsf11bO08712 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tnfrsf11bO08712 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Tnfrsf11bO08712 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Tnfrsf11bO08712 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Tnfrsf11bO08712 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Tnfrsf11bO08712 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Tnfrsf11bO08712 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tnfrsf11bO08712 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Tnfrsf11bO08712 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tnfrsf11bO08712 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Tnfrsf11bO08712 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Tnfrsf11bO08712 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tnfrsf11bO08712 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.55■■□□□ 1.68
Tnfrsf11bO08712 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tnfrsf11bO08712 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Tnfrsf11bO08712 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Tnfrsf11bO08712 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Tnfrsf11bO08712 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Tnfrsf11bO08712 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Tnfrsf11bO08712 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Tnfrsf11bO08712 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Tnfrsf11bO08712 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
Tnfrsf11bO08712 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Tnfrsf11bO08712 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Tnfrsf11bO08712 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Tnfrsf11bO08712 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Tnfrsf11bO08712 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tnfrsf11bO08712 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.49■■□□□ 1.67
Tnfrsf11bO08712 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
Tnfrsf11bO08712 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Tnfrsf11bO08712 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Tnfrsf11bO08712 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Tnfrsf11bO08712 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Tnfrsf11bO08712 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Tnfrsf11bO08712 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Tnfrsf11bO08712 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tnfrsf11bO08712 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tnfrsf11bO08712 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.43■■□□□ 1.66
Tnfrsf11bO08712 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Tnfrsf11bO08712 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.41■■□□□ 1.66
Tnfrsf11bO08712 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.41■■□□□ 1.66
Tnfrsf11bO08712 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Tnfrsf11bO08712 Amer2-203ENSMUST00000225247 2662 ntBASIC25.4■■□□□ 1.66
Tnfrsf11bO08712 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Tnfrsf11bO08712 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Tnfrsf11bO08712 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Tnfrsf11bO08712 Gm24804-201ENSMUST00000174982 85 ntBASIC25.37■■□□□ 1.65
Tnfrsf11bO08712 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Tnfrsf11bO08712 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Tnfrsf11bO08712 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Tnfrsf11bO08712 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.34■■□□□ 1.65
Tnfrsf11bO08712 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Tnfrsf11bO08712 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Tnfrsf11bO08712 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.32■■□□□ 1.64
Tnfrsf11bO08712 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Tnfrsf11bO08712 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tnfrsf11bO08712 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Tnfrsf11bO08712 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Tnfrsf11bO08712 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
Tnfrsf11bO08712 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf11bO08712 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf11bO08712 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tnfrsf11bO08712 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Tnfrsf11bO08712 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
Tnfrsf11bO08712 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tnfrsf11bO08712 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Tnfrsf11bO08712 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Tnfrsf11bO08712 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Tnfrsf11bO08712 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Tnfrsf11bO08712 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tnfrsf11bO08712 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms