Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm20708H3BKF4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.61■■□□□ 1.05
Gm20708H3BKF4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm20708H3BKF4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm20708H3BKF4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm20708H3BKF4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm20708H3BKF4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm20708H3BKF4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm20708H3BKF4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm20708H3BKF4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.58■■□□□ 1.05
Gm20708H3BKF4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm20708H3BKF4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm20708H3BKF4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Gm20708H3BKF4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.56■■□□□ 1.04
Gm20708H3BKF4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm20708H3BKF4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm20708H3BKF4 Gm16148-201ENSMUST00000119653 893 ntBASIC21.54■■□□□ 1.04
Gm20708H3BKF4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm20708H3BKF4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm20708H3BKF4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm20708H3BKF4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gm20708H3BKF4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm20708H3BKF4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.51■■□□□ 1.03
Gm20708H3BKF4 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.5■■□□□ 1.03
Gm20708H3BKF4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Gm20708H3BKF4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm20708H3BKF4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Gm20708H3BKF4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm20708H3BKF4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gm20708H3BKF4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm20708H3BKF4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm20708H3BKF4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Gm20708H3BKF4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm20708H3BKF4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm20708H3BKF4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm20708H3BKF4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Gm20708H3BKF4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm20708H3BKF4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm20708H3BKF4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm20708H3BKF4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm20708H3BKF4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Gm20708H3BKF4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm20708H3BKF4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Gm20708H3BKF4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Gm20708H3BKF4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm20708H3BKF4 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.34■■□□□ 1.01
Gm20708H3BKF4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm20708H3BKF4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Gm20708H3BKF4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm20708H3BKF4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm20708H3BKF4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm20708H3BKF4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm20708H3BKF4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Gm20708H3BKF4 Zxda-201ENSMUST00000117281 2621 ntBASIC21.31■■□□□ 1
Gm20708H3BKF4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm20708H3BKF4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm20708H3BKF4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Gm20708H3BKF4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm20708H3BKF4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.3■■□□□ 1
Gm20708H3BKF4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm20708H3BKF4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gm20708H3BKF4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm20708H3BKF4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm20708H3BKF4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm20708H3BKF4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm20708H3BKF4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm20708H3BKF4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm20708H3BKF4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm20708H3BKF4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Gm20708H3BKF4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm20708H3BKF4 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.24■□□□□ 0.99
Gm20708H3BKF4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Gm20708H3BKF4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Gm20708H3BKF4 Zfp131-205ENSMUST00000223812 663 ntBASIC21.23■□□□□ 0.99
Gm20708H3BKF4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm20708H3BKF4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm20708H3BKF4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm20708H3BKF4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm20708H3BKF4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gm20708H3BKF4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm20708H3BKF4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm20708H3BKF4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm20708H3BKF4 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.18■□□□□ 0.98
Gm20708H3BKF4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm20708H3BKF4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm20708H3BKF4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm20708H3BKF4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm20708H3BKF4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm20708H3BKF4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gm20708H3BKF4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.14■□□□□ 0.98
Gm20708H3BKF4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gm20708H3BKF4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm20708H3BKF4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm20708H3BKF4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.13■□□□□ 0.97
Gm20708H3BKF4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm20708H3BKF4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm20708H3BKF4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.12■□□□□ 0.97
Gm20708H3BKF4 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.12■□□□□ 0.97
Gm20708H3BKF4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm20708H3BKF4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms