Protein–RNA interactions for Protein: E9Q7U0

Kcnmb3, Potassium large conductance calcium-activated channel, subfamily M, beta member 3, mousemouse

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnmb3E9Q7U0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
Kcnmb3E9Q7U0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.63■■□□□ 1.37
Kcnmb3E9Q7U0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Kcnmb3E9Q7U0 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.62■■□□□ 1.37
Kcnmb3E9Q7U0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Kcnmb3E9Q7U0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Kcnmb3E9Q7U0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Kcnmb3E9Q7U0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnmb3E9Q7U0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnmb3E9Q7U0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnmb3E9Q7U0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.59■■□□□ 1.37
Kcnmb3E9Q7U0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnmb3E9Q7U0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnmb3E9Q7U0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Kcnmb3E9Q7U0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.57■■□□□ 1.36
Kcnmb3E9Q7U0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kcnmb3E9Q7U0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kcnmb3E9Q7U0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kcnmb3E9Q7U0 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.55■■□□□ 1.36
Kcnmb3E9Q7U0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Kcnmb3E9Q7U0 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.51■■□□□ 1.35
Kcnmb3E9Q7U0 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.51■■□□□ 1.35
Kcnmb3E9Q7U0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Kcnmb3E9Q7U0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kcnmb3E9Q7U0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Kcnmb3E9Q7U0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Kcnmb3E9Q7U0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kcnmb3E9Q7U0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Kcnmb3E9Q7U0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Kcnmb3E9Q7U0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Kcnmb3E9Q7U0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Kcnmb3E9Q7U0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Kcnmb3E9Q7U0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Kcnmb3E9Q7U0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Kcnmb3E9Q7U0 Gm24804-201ENSMUST00000174982 85 ntBASIC23.45■■□□□ 1.34
Kcnmb3E9Q7U0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Kcnmb3E9Q7U0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Kcnmb3E9Q7U0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Kcnmb3E9Q7U0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Kcnmb3E9Q7U0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Kcnmb3E9Q7U0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Kcnmb3E9Q7U0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Kcnmb3E9Q7U0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Kcnmb3E9Q7U0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Kcnmb3E9Q7U0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kcnmb3E9Q7U0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kcnmb3E9Q7U0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Kcnmb3E9Q7U0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Kcnmb3E9Q7U0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Kcnmb3E9Q7U0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
Kcnmb3E9Q7U0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Kcnmb3E9Q7U0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Kcnmb3E9Q7U0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Kcnmb3E9Q7U0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Kcnmb3E9Q7U0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Kcnmb3E9Q7U0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Kcnmb3E9Q7U0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Kcnmb3E9Q7U0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
Kcnmb3E9Q7U0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Kcnmb3E9Q7U0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Kcnmb3E9Q7U0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.3■■□□□ 1.32
Kcnmb3E9Q7U0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.3■■□□□ 1.32
Kcnmb3E9Q7U0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Kcnmb3E9Q7U0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Kcnmb3E9Q7U0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Kcnmb3E9Q7U0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Kcnmb3E9Q7U0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Kcnmb3E9Q7U0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Kcnmb3E9Q7U0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Kcnmb3E9Q7U0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Kcnmb3E9Q7U0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Kcnmb3E9Q7U0 Amer2-203ENSMUST00000225247 2662 ntBASIC23.26■■□□□ 1.31
Kcnmb3E9Q7U0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Kcnmb3E9Q7U0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Kcnmb3E9Q7U0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.23■■□□□ 1.31
Kcnmb3E9Q7U0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.22■■□□□ 1.31
Kcnmb3E9Q7U0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnmb3E9Q7U0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnmb3E9Q7U0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnmb3E9Q7U0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.2■■□□□ 1.3
Kcnmb3E9Q7U0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kcnmb3E9Q7U0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Kcnmb3E9Q7U0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcnmb3E9Q7U0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcnmb3E9Q7U0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Kcnmb3E9Q7U0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.17■■□□□ 1.3
Kcnmb3E9Q7U0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kcnmb3E9Q7U0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Kcnmb3E9Q7U0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Kcnmb3E9Q7U0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Kcnmb3E9Q7U0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.14■■□□□ 1.29
Kcnmb3E9Q7U0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Kcnmb3E9Q7U0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Kcnmb3E9Q7U0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Kcnmb3E9Q7U0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Kcnmb3E9Q7U0 Gm16148-201ENSMUST00000119653 893 ntBASIC23.11■■□□□ 1.29
Kcnmb3E9Q7U0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Kcnmb3E9Q7U0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Kcnmb3E9Q7U0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.1■■□□□ 1.29
Kcnmb3E9Q7U0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms