Protein–RNA interactions for Protein: E9Q2C0

Cfap46, Cilia and flagella-associated protein 46, mousemouse

Predictions only

Length 2,641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap46E9Q2C0 Gm15039-201ENSMUST00000118914 875 ntBASIC24.22■■□□□ 1.47
Cfap46E9Q2C0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cfap46E9Q2C0 Mir6538-201ENSMUST00000183713 110 ntBASIC24.21■■□□□ 1.47
Cfap46E9Q2C0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cfap46E9Q2C0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cfap46E9Q2C0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.18■■□□□ 1.46
Cfap46E9Q2C0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.17■■□□□ 1.46
Cfap46E9Q2C0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Cfap46E9Q2C0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.14■■□□□ 1.46
Cfap46E9Q2C0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Cfap46E9Q2C0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.46
Cfap46E9Q2C0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap46E9Q2C0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap46E9Q2C0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.1■■□□□ 1.45
Cfap46E9Q2C0 Mipep-204ENSMUST00000225043 1548 ntBASIC24.1■■□□□ 1.45
Cfap46E9Q2C0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cfap46E9Q2C0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.08■■□□□ 1.44
Cfap46E9Q2C0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap46E9Q2C0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap46E9Q2C0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cfap46E9Q2C0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap46E9Q2C0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.05■■□□□ 1.44
Cfap46E9Q2C0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Cfap46E9Q2C0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.04■■□□□ 1.44
Cfap46E9Q2C0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cfap46E9Q2C0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cfap46E9Q2C0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cfap46E9Q2C0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cfap46E9Q2C0 Gm11175-201ENSMUST00000116172 543 ntBASIC24.02■■□□□ 1.44
Cfap46E9Q2C0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cfap46E9Q2C0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24■■□□□ 1.43
Cfap46E9Q2C0 Cap2-205ENSMUST00000225824 1634 ntBASIC23.97■■□□□ 1.43
Cfap46E9Q2C0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap46E9Q2C0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap46E9Q2C0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Cfap46E9Q2C0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cfap46E9Q2C0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.94■■□□□ 1.42
Cfap46E9Q2C0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.94■■□□□ 1.42
Cfap46E9Q2C0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap46E9Q2C0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cfap46E9Q2C0 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.93■■□□□ 1.42
Cfap46E9Q2C0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap46E9Q2C0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap46E9Q2C0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap46E9Q2C0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cfap46E9Q2C0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cfap46E9Q2C0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Cfap46E9Q2C0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap46E9Q2C0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Cfap46E9Q2C0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.86■■□□□ 1.41
Cfap46E9Q2C0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cfap46E9Q2C0 Gm11599-201ENSMUST00000118720 878 ntBASIC23.85■■□□□ 1.41
Cfap46E9Q2C0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Cfap46E9Q2C0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cfap46E9Q2C0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cfap46E9Q2C0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cfap46E9Q2C0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cfap46E9Q2C0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cfap46E9Q2C0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.78■■□□□ 1.4
Cfap46E9Q2C0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cfap46E9Q2C0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Cfap46E9Q2C0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Cfap46E9Q2C0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cfap46E9Q2C0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cfap46E9Q2C0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cfap46E9Q2C0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cfap46E9Q2C0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cfap46E9Q2C0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap46E9Q2C0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap46E9Q2C0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap46E9Q2C0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.73■■□□□ 1.39
Cfap46E9Q2C0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap46E9Q2C0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap46E9Q2C0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Cfap46E9Q2C0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap46E9Q2C0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap46E9Q2C0 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.71■■□□□ 1.39
Cfap46E9Q2C0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap46E9Q2C0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap46E9Q2C0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cfap46E9Q2C0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Cfap46E9Q2C0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cfap46E9Q2C0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cfap46E9Q2C0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.64■■□□□ 1.38
Cfap46E9Q2C0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cfap46E9Q2C0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cfap46E9Q2C0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Cfap46E9Q2C0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap46E9Q2C0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Cfap46E9Q2C0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap46E9Q2C0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cfap46E9Q2C0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cfap46E9Q2C0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Cfap46E9Q2C0 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.56■■□□□ 1.36
Cfap46E9Q2C0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap46E9Q2C0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap46E9Q2C0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cfap46E9Q2C0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.55■■□□□ 1.36
Cfap46E9Q2C0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.54■■□□□ 1.36
Cfap46E9Q2C0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms