Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lnp1A0A1B0GSK3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lnp1A0A1B0GSK3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lnp1A0A1B0GSK3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lnp1A0A1B0GSK3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.04■□□□□ 0.96
Lnp1A0A1B0GSK3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lnp1A0A1B0GSK3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lnp1A0A1B0GSK3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lnp1A0A1B0GSK3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lnp1A0A1B0GSK3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lnp1A0A1B0GSK3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lnp1A0A1B0GSK3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lnp1A0A1B0GSK3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lnp1A0A1B0GSK3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Lnp1A0A1B0GSK3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lnp1A0A1B0GSK3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lnp1A0A1B0GSK3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.99■□□□□ 0.95
Lnp1A0A1B0GSK3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lnp1A0A1B0GSK3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Lnp1A0A1B0GSK3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Lnp1A0A1B0GSK3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lnp1A0A1B0GSK3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lnp1A0A1B0GSK3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lnp1A0A1B0GSK3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lnp1A0A1B0GSK3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lnp1A0A1B0GSK3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lnp1A0A1B0GSK3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lnp1A0A1B0GSK3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lnp1A0A1B0GSK3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.93■□□□□ 0.94
Lnp1A0A1B0GSK3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lnp1A0A1B0GSK3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Lnp1A0A1B0GSK3 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.91■□□□□ 0.94
Lnp1A0A1B0GSK3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lnp1A0A1B0GSK3 Gm16148-201ENSMUST00000119653 893 ntBASIC20.9■□□□□ 0.94
Lnp1A0A1B0GSK3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lnp1A0A1B0GSK3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.88■□□□□ 0.93
Lnp1A0A1B0GSK3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Lnp1A0A1B0GSK3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Lnp1A0A1B0GSK3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lnp1A0A1B0GSK3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lnp1A0A1B0GSK3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Lnp1A0A1B0GSK3 Zxda-201ENSMUST00000117281 2621 ntBASIC20.86■□□□□ 0.93
Lnp1A0A1B0GSK3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lnp1A0A1B0GSK3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lnp1A0A1B0GSK3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Lnp1A0A1B0GSK3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.83■□□□□ 0.93
Lnp1A0A1B0GSK3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lnp1A0A1B0GSK3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Lnp1A0A1B0GSK3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lnp1A0A1B0GSK3 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.82■□□□□ 0.92
Lnp1A0A1B0GSK3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lnp1A0A1B0GSK3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lnp1A0A1B0GSK3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lnp1A0A1B0GSK3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lnp1A0A1B0GSK3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Lnp1A0A1B0GSK3 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.8■□□□□ 0.92
Lnp1A0A1B0GSK3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lnp1A0A1B0GSK3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lnp1A0A1B0GSK3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Lnp1A0A1B0GSK3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.78■□□□□ 0.92
Lnp1A0A1B0GSK3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lnp1A0A1B0GSK3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lnp1A0A1B0GSK3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lnp1A0A1B0GSK3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lnp1A0A1B0GSK3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lnp1A0A1B0GSK3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lnp1A0A1B0GSK3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lnp1A0A1B0GSK3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lnp1A0A1B0GSK3 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.74■□□□□ 0.91
Lnp1A0A1B0GSK3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lnp1A0A1B0GSK3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lnp1A0A1B0GSK3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Lnp1A0A1B0GSK3 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.71■□□□□ 0.91
Lnp1A0A1B0GSK3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lnp1A0A1B0GSK3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lnp1A0A1B0GSK3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Lnp1A0A1B0GSK3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Lnp1A0A1B0GSK3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Lnp1A0A1B0GSK3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lnp1A0A1B0GSK3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lnp1A0A1B0GSK3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lnp1A0A1B0GSK3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lnp1A0A1B0GSK3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lnp1A0A1B0GSK3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lnp1A0A1B0GSK3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lnp1A0A1B0GSK3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lnp1A0A1B0GSK3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lnp1A0A1B0GSK3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.65■□□□□ 0.9
Lnp1A0A1B0GSK3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lnp1A0A1B0GSK3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lnp1A0A1B0GSK3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lnp1A0A1B0GSK3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lnp1A0A1B0GSK3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Lnp1A0A1B0GSK3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lnp1A0A1B0GSK3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.6■□□□□ 0.89
Lnp1A0A1B0GSK3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lnp1A0A1B0GSK3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lnp1A0A1B0GSK3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lnp1A0A1B0GSK3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lnp1A0A1B0GSK3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms