Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.26■□□□□ 0.83
Trav13n-4A0A0G2JG01 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav13n-4A0A0G2JG01 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav13n-4A0A0G2JG01 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav13n-4A0A0G2JG01 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trav13n-4A0A0G2JG01 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trav13n-4A0A0G2JG01 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.24■□□□□ 0.83
Trav13n-4A0A0G2JG01 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav13n-4A0A0G2JG01 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav13n-4A0A0G2JG01 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trav13n-4A0A0G2JG01 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.19■□□□□ 0.82
Trav13n-4A0A0G2JG01 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav13n-4A0A0G2JG01 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav13n-4A0A0G2JG01 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.18■□□□□ 0.82
Trav13n-4A0A0G2JG01 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav13n-4A0A0G2JG01 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav13n-4A0A0G2JG01 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav13n-4A0A0G2JG01 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav13n-4A0A0G2JG01 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.16■□□□□ 0.82
Trav13n-4A0A0G2JG01 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav13n-4A0A0G2JG01 Gm45855-201ENSMUST00000212546 880 ntBASIC20.15■□□□□ 0.82
Trav13n-4A0A0G2JG01 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.15■□□□□ 0.82
Trav13n-4A0A0G2JG01 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav13n-4A0A0G2JG01 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.13■□□□□ 0.81
Trav13n-4A0A0G2JG01 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav13n-4A0A0G2JG01 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav13n-4A0A0G2JG01 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav13n-4A0A0G2JG01 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav13n-4A0A0G2JG01 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav13n-4A0A0G2JG01 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
Trav13n-4A0A0G2JG01 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.11■□□□□ 0.81
Trav13n-4A0A0G2JG01 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav13n-4A0A0G2JG01 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trav13n-4A0A0G2JG01 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.09■□□□□ 0.81
Trav13n-4A0A0G2JG01 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trav13n-4A0A0G2JG01 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav13n-4A0A0G2JG01 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav13n-4A0A0G2JG01 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav13n-4A0A0G2JG01 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav13n-4A0A0G2JG01 Zxda-201ENSMUST00000117281 2621 ntBASIC20.08■□□□□ 0.8
Trav13n-4A0A0G2JG01 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.08■□□□□ 0.8
Trav13n-4A0A0G2JG01 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trav13n-4A0A0G2JG01 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trav13n-4A0A0G2JG01 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav13n-4A0A0G2JG01 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav13n-4A0A0G2JG01 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav13n-4A0A0G2JG01 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav13n-4A0A0G2JG01 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav13n-4A0A0G2JG01 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav13n-4A0A0G2JG01 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav13n-4A0A0G2JG01 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav13n-4A0A0G2JG01 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav13n-4A0A0G2JG01 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Trav13n-4A0A0G2JG01 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav13n-4A0A0G2JG01 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav13n-4A0A0G2JG01 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav13n-4A0A0G2JG01 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.98■□□□□ 0.79
Trav13n-4A0A0G2JG01 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav13n-4A0A0G2JG01 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav13n-4A0A0G2JG01 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trav13n-4A0A0G2JG01 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav13n-4A0A0G2JG01 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav13n-4A0A0G2JG01 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav13n-4A0A0G2JG01 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav13n-4A0A0G2JG01 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav13n-4A0A0G2JG01 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav13n-4A0A0G2JG01 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav13n-4A0A0G2JG01 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav13n-4A0A0G2JG01 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav13n-4A0A0G2JG01 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav13n-4A0A0G2JG01 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav13n-4A0A0G2JG01 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
Trav13n-4A0A0G2JG01 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav13n-4A0A0G2JG01 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav13n-4A0A0G2JG01 Gm9397-201ENSMUST00000200125 605 ntBASIC19.9■□□□□ 0.78
Trav13n-4A0A0G2JG01 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav13n-4A0A0G2JG01 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav13n-4A0A0G2JG01 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav13n-4A0A0G2JG01 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Trav13n-4A0A0G2JG01 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav13n-4A0A0G2JG01 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav13n-4A0A0G2JG01 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.88■□□□□ 0.77
Trav13n-4A0A0G2JG01 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav13n-4A0A0G2JG01 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav13n-4A0A0G2JG01 Amer2-203ENSMUST00000225247 2662 ntBASIC19.86■□□□□ 0.77
Trav13n-4A0A0G2JG01 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.86■□□□□ 0.77
Trav13n-4A0A0G2JG01 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trav13n-4A0A0G2JG01 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav13n-4A0A0G2JG01 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13n-4A0A0G2JG01 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13n-4A0A0G2JG01 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13n-4A0A0G2JG01 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13n-4A0A0G2JG01 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13n-4A0A0G2JG01 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13n-4A0A0G2JG01 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav13n-4A0A0G2JG01 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav13n-4A0A0G2JG01 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav13n-4A0A0G2JG01 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav13n-4A0A0G2JG01 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav13n-4A0A0G2JG01 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms