Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Peli2-204ENSMUST00000226513 1320 ntBASIC17.71■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.7■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.66■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-53A0A0G2JFC6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Gm24804-201ENSMUST00000174982 85 ntBASIC17.63■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv4-53A0A0G2JFC6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.58■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-53A0A0G2JFC6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.47■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.46■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Igkv4-53A0A0G2JFC6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-53A0A0G2JFC6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.45■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Zxda-201ENSMUST00000117281 2621 ntBASIC17.44■□□□□ 0.38
Igkv4-53A0A0G2JFC6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.44■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Igkv4-53A0A0G2JFC6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.43■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.42■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Gm16148-201ENSMUST00000119653 893 ntBASIC17.4■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Igkv4-53A0A0G2JFC6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv4-53A0A0G2JFC6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv4-53A0A0G2JFC6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Igkv4-53A0A0G2JFC6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Igkv4-53A0A0G2JFC6 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms