Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv19A0A0B4J1H4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv19A0A0B4J1H4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv19A0A0B4J1H4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv19A0A0B4J1H4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.27■□□□□ 0.83
Trbv19A0A0B4J1H4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.26■□□□□ 0.83
Trbv19A0A0B4J1H4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv19A0A0B4J1H4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbv19A0A0B4J1H4 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.25■□□□□ 0.83
Trbv19A0A0B4J1H4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trbv19A0A0B4J1H4 Peli2-204ENSMUST00000226513 1320 ntBASIC20.24■□□□□ 0.83
Trbv19A0A0B4J1H4 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.23■□□□□ 0.83
Trbv19A0A0B4J1H4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv19A0A0B4J1H4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv19A0A0B4J1H4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv19A0A0B4J1H4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv19A0A0B4J1H4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv19A0A0B4J1H4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trbv19A0A0B4J1H4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv19A0A0B4J1H4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv19A0A0B4J1H4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv19A0A0B4J1H4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv19A0A0B4J1H4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv19A0A0B4J1H4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trbv19A0A0B4J1H4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv19A0A0B4J1H4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv19A0A0B4J1H4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trbv19A0A0B4J1H4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv19A0A0B4J1H4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trbv19A0A0B4J1H4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trbv19A0A0B4J1H4 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.15■□□□□ 0.82
Trbv19A0A0B4J1H4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv19A0A0B4J1H4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trbv19A0A0B4J1H4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv19A0A0B4J1H4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv19A0A0B4J1H4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv19A0A0B4J1H4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trbv19A0A0B4J1H4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trbv19A0A0B4J1H4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv19A0A0B4J1H4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.1■□□□□ 0.81
Trbv19A0A0B4J1H4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv19A0A0B4J1H4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trbv19A0A0B4J1H4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trbv19A0A0B4J1H4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trbv19A0A0B4J1H4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trbv19A0A0B4J1H4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trbv19A0A0B4J1H4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv19A0A0B4J1H4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trbv19A0A0B4J1H4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbv19A0A0B4J1H4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbv19A0A0B4J1H4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trbv19A0A0B4J1H4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv19A0A0B4J1H4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv19A0A0B4J1H4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trbv19A0A0B4J1H4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.04■□□□□ 0.8
Trbv19A0A0B4J1H4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv19A0A0B4J1H4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
Trbv19A0A0B4J1H4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv19A0A0B4J1H4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv19A0A0B4J1H4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv19A0A0B4J1H4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trbv19A0A0B4J1H4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trbv19A0A0B4J1H4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trbv19A0A0B4J1H4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Trbv19A0A0B4J1H4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv19A0A0B4J1H4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trbv19A0A0B4J1H4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv19A0A0B4J1H4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv19A0A0B4J1H4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv19A0A0B4J1H4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv19A0A0B4J1H4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv19A0A0B4J1H4 Gm24804-201ENSMUST00000174982 85 ntBASIC19.98■□□□□ 0.79
Trbv19A0A0B4J1H4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv19A0A0B4J1H4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.97■□□□□ 0.79
Trbv19A0A0B4J1H4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trbv19A0A0B4J1H4 Amer2-203ENSMUST00000225247 2662 ntBASIC19.97■□□□□ 0.79
Trbv19A0A0B4J1H4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.96■□□□□ 0.79
Trbv19A0A0B4J1H4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.95■□□□□ 0.78
Trbv19A0A0B4J1H4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv19A0A0B4J1H4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv19A0A0B4J1H4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv19A0A0B4J1H4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv19A0A0B4J1H4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv19A0A0B4J1H4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.92■□□□□ 0.78
Trbv19A0A0B4J1H4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv19A0A0B4J1H4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv19A0A0B4J1H4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trbv19A0A0B4J1H4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv19A0A0B4J1H4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.9■□□□□ 0.78
Trbv19A0A0B4J1H4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv19A0A0B4J1H4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trbv19A0A0B4J1H4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv19A0A0B4J1H4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trbv19A0A0B4J1H4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Trbv19A0A0B4J1H4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Trbv19A0A0B4J1H4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv19A0A0B4J1H4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv19A0A0B4J1H4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv19A0A0B4J1H4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv19A0A0B4J1H4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms