Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.96■□□□□ 0.63
Ighv1-9A0A0A6YW37 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Ighv1-9A0A0A6YW37 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ighv1-9A0A0A6YW37 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Ighv1-9A0A0A6YW37 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.94■□□□□ 0.62
Ighv1-9A0A0A6YW37 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ighv1-9A0A0A6YW37 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-9A0A0A6YW37 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-9A0A0A6YW37 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-9A0A0A6YW37 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-9A0A0A6YW37 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-9A0A0A6YW37 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-9A0A0A6YW37 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.89■□□□□ 0.62
Ighv1-9A0A0A6YW37 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.89■□□□□ 0.62
Ighv1-9A0A0A6YW37 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.88■□□□□ 0.61
Ighv1-9A0A0A6YW37 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.88■□□□□ 0.61
Ighv1-9A0A0A6YW37 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-9A0A0A6YW37 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-9A0A0A6YW37 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-9A0A0A6YW37 Peli2-204ENSMUST00000226513 1320 ntBASIC18.86■□□□□ 0.61
Ighv1-9A0A0A6YW37 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-9A0A0A6YW37 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ighv1-9A0A0A6YW37 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.84■□□□□ 0.61
Ighv1-9A0A0A6YW37 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-9A0A0A6YW37 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ighv1-9A0A0A6YW37 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Ighv1-9A0A0A6YW37 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-9A0A0A6YW37 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-9A0A0A6YW37 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-9A0A0A6YW37 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-9A0A0A6YW37 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-9A0A0A6YW37 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-9A0A0A6YW37 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ighv1-9A0A0A6YW37 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-9A0A0A6YW37 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-9A0A0A6YW37 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-9A0A0A6YW37 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-9A0A0A6YW37 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ighv1-9A0A0A6YW37 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ighv1-9A0A0A6YW37 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-9A0A0A6YW37 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ighv1-9A0A0A6YW37 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-9A0A0A6YW37 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-9A0A0A6YW37 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.78■□□□□ 0.6
Ighv1-9A0A0A6YW37 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ighv1-9A0A0A6YW37 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ighv1-9A0A0A6YW37 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-9A0A0A6YW37 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-9A0A0A6YW37 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-9A0A0A6YW37 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-9A0A0A6YW37 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-9A0A0A6YW37 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-9A0A0A6YW37 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ighv1-9A0A0A6YW37 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-9A0A0A6YW37 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-9A0A0A6YW37 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-9A0A0A6YW37 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-9A0A0A6YW37 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-9A0A0A6YW37 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-9A0A0A6YW37 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.71■□□□□ 0.59
Ighv1-9A0A0A6YW37 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ighv1-9A0A0A6YW37 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ighv1-9A0A0A6YW37 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-9A0A0A6YW37 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-9A0A0A6YW37 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-9A0A0A6YW37 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.69■□□□□ 0.58
Ighv1-9A0A0A6YW37 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-9A0A0A6YW37 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Ighv1-9A0A0A6YW37 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-9A0A0A6YW37 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-9A0A0A6YW37 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-9A0A0A6YW37 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ighv1-9A0A0A6YW37 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Ighv1-9A0A0A6YW37 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-9A0A0A6YW37 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-9A0A0A6YW37 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-9A0A0A6YW37 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-9A0A0A6YW37 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-9A0A0A6YW37 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-9A0A0A6YW37 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-9A0A0A6YW37 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-9A0A0A6YW37 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-9A0A0A6YW37 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.64■□□□□ 0.57
Ighv1-9A0A0A6YW37 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv1-9A0A0A6YW37 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv1-9A0A0A6YW37 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-9A0A0A6YW37 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-9A0A0A6YW37 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-9A0A0A6YW37 Amer2-203ENSMUST00000225247 2662 ntBASIC18.62■□□□□ 0.57
Ighv1-9A0A0A6YW37 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ighv1-9A0A0A6YW37 Gm24804-201ENSMUST00000174982 85 ntBASIC18.6■□□□□ 0.57
Ighv1-9A0A0A6YW37 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-9A0A0A6YW37 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-9A0A0A6YW37 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.59■□□□□ 0.57
Ighv1-9A0A0A6YW37 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-9A0A0A6YW37 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-9A0A0A6YW37 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.58■□□□□ 0.56
Ighv1-9A0A0A6YW37 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-9A0A0A6YW37 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-9A0A0A6YW37 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms