Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 ASG7YJL170C 630 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 RPL17AYKL180W 555 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 YKR041WYKR041W 753 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 YML084WYML084W 309 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 MRPL19YNL185C 477 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 MPD2YOL088C 834 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 YSY6YBR162W-A 198 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 ARX1YDR101C 1782 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 SYP1YCR030C 2613 nt5.05□□□□□ -1.6
TY1A-PR3Q6Q5H1 NTH1YDR001C 2256 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 YDR154CYDR154C 351 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 YER076CYER076C 909 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 YAP5YIR018W 738 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 ASF1YJL115W 840 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 YMR315WYMR315W 1050 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 ATG3YNR007C 933 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 TRM112YNR046W 408 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 YPL088WYPL088W 1029 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 SEC66YBR171W 621 nt5.04□□□□□ -1.6
TY1A-PR3Q6Q5H1 CUE3YGL110C 1875 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 HSP78YDR258C 2436 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 SPB4YFL002C 1821 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 YCL075WYCL075W 441 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 tR(ACG)DtR(ACG)D 73 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 tR(ACG)EtR(ACG)E 73 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 tR(ACG)KtR(ACG)K 73 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 tR(ACG)LtR(ACG)L 73 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 tR(ACG)OtR(ACG)O 73 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 PHO86YJL117W 936 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 PIR3YKL163W 978 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 YNR021WYNR021W 1215 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 YPL114WYPL114W 420 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 UGA3YDL170W 1587 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 AAP1YHR047C 2571 nt5.03□□□□□ -1.6
TY1A-PR3Q6Q5H1 VTH1YIL173W 4650 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 VTH2YJL222W 4650 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 PRM7YDL039C 2097 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 GPD1YDL022W 1176 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 YDL057WYDL057W 987 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 PUG1YER185W 912 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 TAM41YGR046W 1158 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 CYS3YAL012W 1185 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 OCA2YNL056W 594 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 MRPS18YNL306W 654 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 CDC21YOR074C 915 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 MRPL51YPR100W 423 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 BUD7YOR299W 2241 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 FMP30YPL103C 1407 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 FRE3YOR381W 2136 nt5.02□□□□□ -1.61
TY1A-PR3Q6Q5H1 YDR170W-AYDR170W-A 1323 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 YMR046CYMR046C 1323 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 ESA1YOR244W 1338 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 UGA1YGR019W 1416 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 YEL077CYEL077C 3834 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 SIP2YGL208W 1248 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 YKL102CYKL102C 306 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 YLR171WYLR171W 390 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 HRI1YLR301W 735 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 RHO2YNL090W 579 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 RUF23RUF23 254 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 MBF1YOR298C-A 456 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 YPL119C-AYPL119C-A 264 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 CBP3YPL215W 1008 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 THR4YCR053W 1545 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 VAN1YML115C 1608 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 YVC1YOR087W 2028 nt5.01□□□□□ -1.61
TY1A-PR3Q6Q5H1 NRD1YNL251C 1728 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 RAD24YER173W 1980 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 THI20YOL055C 1656 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 YNL095CYNL095C 1929 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 PBP4YDL053C 558 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 MRF1YGL143C 1242 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 YIL177W-AYIL177W-A 483 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 YJL225W-AYJL225W-A 483 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 YJR037WYJR037W 384 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 TDA5YLR426W 981 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 TOM22YNL131W 459 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 YRO2YBR054W 1035 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 RAD28YDR030C 1521 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 YHK8YHR048W 1545 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 HSF1YGL073W 2502 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 SSY5YJL156C 2100 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 YOR365CYOR365C 2112 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 WHI2YOR043W 1461 nt5□□□□□ -1.61
TY1A-PR3Q6Q5H1 RTS1YOR014W 2274 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 HCM1YCR065W 1695 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 VPS1YKR001C 2115 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 MEF2YJL102W 2460 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 DHR2YKL078W 2208 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 YER148W-AYER148W-A 579 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 LDB18YLL049W 540 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 BUR2YLR226W 1188 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 DDR48YMR173W 1293 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 YBL055CYBL055C 1257 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 PHO80YOL001W 882 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 YPL077CYPL077C 723 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 APD1YBR151W 951 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 SUL2YLR092W 2682 nt4.99□□□□□ -1.61
TY1A-PR3Q6Q5H1 TFA1YKL028W 1449 nt4.98□□□□□ -1.61
TY1A-PR3Q6Q5H1 MCM3YEL032W 2916 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms