Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf7Q8BTV2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf7Q8BTV2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf7Q8BTV2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf7Q8BTV2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf7Q8BTV2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.27■□□□□ 0.68
Cpsf7Q8BTV2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf7Q8BTV2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf7Q8BTV2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf7Q8BTV2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf7Q8BTV2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cpsf7Q8BTV2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpsf7Q8BTV2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Cpsf7Q8BTV2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpsf7Q8BTV2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpsf7Q8BTV2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cpsf7Q8BTV2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Cpsf7Q8BTV2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Gm7417-201ENSMUST00000192950 473 ntBASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf7Q8BTV2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf7Q8BTV2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms