Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc3Q8R323 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Rfc3Q8R323 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc3Q8R323 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfc3Q8R323 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.79■□□□□ 0.44
Rfc3Q8R323 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rfc3Q8R323 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfc3Q8R323 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfc3Q8R323 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfc3Q8R323 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfc3Q8R323 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rfc3Q8R323 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc3Q8R323 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc3Q8R323 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc3Q8R323 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc3Q8R323 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc3Q8R323 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rfc3Q8R323 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rfc3Q8R323 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.75■□□□□ 0.43
Rfc3Q8R323 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.75■□□□□ 0.43
Rfc3Q8R323 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc3Q8R323 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc3Q8R323 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc3Q8R323 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc3Q8R323 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc3Q8R323 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rfc3Q8R323 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Rfc3Q8R323 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc3Q8R323 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc3Q8R323 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.74■□□□□ 0.43
Rfc3Q8R323 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Gm7291-201ENSMUST00000199147 382 ntBASIC17.73■□□□□ 0.43
Rfc3Q8R323 Gm42778-201ENSMUST00000199644 553 ntBASIC17.73■□□□□ 0.43
Rfc3Q8R323 Gm18671-201ENSMUST00000214826 683 ntBASIC17.73■□□□□ 0.43
Rfc3Q8R323 Gm9988-201ENSMUST00000069786 435 ntBASIC17.73■□□□□ 0.43
Rfc3Q8R323 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc3Q8R323 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc3Q8R323 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc3Q8R323 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc3Q8R323 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc3Q8R323 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.72■□□□□ 0.43
Rfc3Q8R323 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms