Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clns1aQ61189 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clns1aQ61189 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.53■□□□□ 0.24
Clns1aQ61189 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.53■□□□□ 0.24
Clns1aQ61189 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.53■□□□□ 0.24
Clns1aQ61189 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clns1aQ61189 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clns1aQ61189 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clns1aQ61189 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clns1aQ61189 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clns1aQ61189 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.52■□□□□ 0.24
Clns1aQ61189 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clns1aQ61189 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Clns1aQ61189 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Clns1aQ61189 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clns1aQ61189 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clns1aQ61189 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
Clns1aQ61189 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clns1aQ61189 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clns1aQ61189 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Clns1aQ61189 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Clns1aQ61189 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Clns1aQ61189 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clns1aQ61189 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Clns1aQ61189 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Clns1aQ61189 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Clns1aQ61189 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.5■□□□□ 0.23
Clns1aQ61189 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.5■□□□□ 0.23
Clns1aQ61189 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Clns1aQ61189 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clns1aQ61189 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Clns1aQ61189 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Clns1aQ61189 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clns1aQ61189 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clns1aQ61189 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Clns1aQ61189 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clns1aQ61189 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Clns1aQ61189 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.49■□□□□ 0.23
Clns1aQ61189 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clns1aQ61189 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clns1aQ61189 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clns1aQ61189 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Clns1aQ61189 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Clns1aQ61189 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Clns1aQ61189 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.48■□□□□ 0.23
Clns1aQ61189 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.48■□□□□ 0.23
Clns1aQ61189 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.48■□□□□ 0.23
Clns1aQ61189 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Clns1aQ61189 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Clns1aQ61189 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Clns1aQ61189 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clns1aQ61189 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clns1aQ61189 Mir6538-201ENSMUST00000183713 110 ntBASIC16.47■□□□□ 0.23
Clns1aQ61189 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms