Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ccdc141E9Q8Q6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ccdc141E9Q8Q6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
Ccdc141E9Q8Q6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ccdc141E9Q8Q6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Ccdc141E9Q8Q6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
Ccdc141E9Q8Q6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC29.62■■■□□ 2.33
Ccdc141E9Q8Q6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Ccdc141E9Q8Q6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC29.61■■■□□ 2.33
Ccdc141E9Q8Q6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ccdc141E9Q8Q6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Ccdc141E9Q8Q6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ccdc141E9Q8Q6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ccdc141E9Q8Q6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ccdc141E9Q8Q6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Ccdc141E9Q8Q6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC29.6■■■□□ 2.33
Ccdc141E9Q8Q6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ccdc141E9Q8Q6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Ccdc141E9Q8Q6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
Ccdc141E9Q8Q6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC29.59■■■□□ 2.33
Ccdc141E9Q8Q6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC29.59■■■□□ 2.33
Ccdc141E9Q8Q6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ccdc141E9Q8Q6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC29.59■■■□□ 2.33
Ccdc141E9Q8Q6 Gm5643-201ENSMUST00000117081 966 ntBASIC29.58■■■□□ 2.33
Ccdc141E9Q8Q6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Ccdc141E9Q8Q6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ccdc141E9Q8Q6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC29.57■■■□□ 2.32
Ccdc141E9Q8Q6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc141E9Q8Q6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc141E9Q8Q6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc141E9Q8Q6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ccdc141E9Q8Q6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ccdc141E9Q8Q6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Ccdc141E9Q8Q6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ccdc141E9Q8Q6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC29.56■■■□□ 2.32
Ccdc141E9Q8Q6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc141E9Q8Q6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Ccdc141E9Q8Q6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Ccdc141E9Q8Q6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ccdc141E9Q8Q6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ccdc141E9Q8Q6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ccdc141E9Q8Q6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc141E9Q8Q6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc141E9Q8Q6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
Ccdc141E9Q8Q6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC29.53■■■□□ 2.32
Ccdc141E9Q8Q6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC29.53■■■□□ 2.32
Ccdc141E9Q8Q6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
Ccdc141E9Q8Q6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC29.53■■■□□ 2.32
Ccdc141E9Q8Q6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ccdc141E9Q8Q6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Ccdc141E9Q8Q6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
Ccdc141E9Q8Q6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC29.52■■■□□ 2.32
Ccdc141E9Q8Q6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC29.52■■■□□ 2.32
Ccdc141E9Q8Q6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC29.52■■■□□ 2.32
Ccdc141E9Q8Q6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC29.52■■■□□ 2.32
Ccdc141E9Q8Q6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ccdc141E9Q8Q6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Ccdc141E9Q8Q6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC29.51■■■□□ 2.32
Ccdc141E9Q8Q6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc141E9Q8Q6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc141E9Q8Q6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc141E9Q8Q6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc141E9Q8Q6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Dio3-201ENSMUST00000097228 1449 ntBASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Gm715-201ENSMUST00000117865 831 ntBASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Gm29994-201ENSMUST00000195495 1193 ntBASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Gm2559-201ENSMUST00000201323 363 ntBASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc141E9Q8Q6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Ccdc141E9Q8Q6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC29.49■■■□□ 2.31
Ccdc141E9Q8Q6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC29.49■■■□□ 2.31
Ccdc141E9Q8Q6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc141E9Q8Q6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc141E9Q8Q6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc141E9Q8Q6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC29.48■■■□□ 2.31
Ccdc141E9Q8Q6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ccdc141E9Q8Q6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Ccdc141E9Q8Q6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Ccdc141E9Q8Q6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Ccdc141E9Q8Q6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc141E9Q8Q6 Gm6576-201ENSMUST00000169678 883 ntBASIC29.47■■■□□ 2.31
Ccdc141E9Q8Q6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Ccdc141E9Q8Q6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc141E9Q8Q6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc141E9Q8Q6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms