Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.34□□□□□ -0.43
Smim29Q8R043 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Smim29Q8R043 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
Smim29Q8R043 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
Smim29Q8R043 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.34□□□□□ -0.43
Smim29Q8R043 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Gm22238-201ENSMUST00000175222 88 ntBASIC12.34□□□□□ -0.43
Smim29Q8R043 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.34□□□□□ -0.43
Smim29Q8R043 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim29Q8R043 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.33□□□□□ -0.44
Smim29Q8R043 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smim29Q8R043 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smim29Q8R043 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim29Q8R043 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Smim29Q8R043 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smim29Q8R043 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.32□□□□□ -0.44
Smim29Q8R043 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Smim29Q8R043 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim29Q8R043 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smim29Q8R043 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim29Q8R043 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.32□□□□□ -0.44
Smim29Q8R043 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.32□□□□□ -0.44
Smim29Q8R043 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim29Q8R043 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim29Q8R043 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim29Q8R043 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smim29Q8R043 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim29Q8R043 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim29Q8R043 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC12.31□□□□□ -0.44
Smim29Q8R043 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.31□□□□□ -0.44
Smim29Q8R043 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smim29Q8R043 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.31□□□□□ -0.44
Smim29Q8R043 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smim29Q8R043 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim29Q8R043 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.3□□□□□ -0.44
Smim29Q8R043 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.3□□□□□ -0.44
Smim29Q8R043 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.3□□□□□ -0.44
Smim29Q8R043 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Smim29Q8R043 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Gm14117-201ENSMUST00000122417 843 ntBASIC12.3□□□□□ -0.44
Smim29Q8R043 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Smim29Q8R043 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.3□□□□□ -0.44
Smim29Q8R043 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.3□□□□□ -0.44
Smim29Q8R043 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smim29Q8R043 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smim29Q8R043 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Smim29Q8R043 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim29Q8R043 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smim29Q8R043 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim29Q8R043 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim29Q8R043 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim29Q8R043 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smim29Q8R043 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.29□□□□□ -0.44
Smim29Q8R043 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.29□□□□□ -0.44
Smim29Q8R043 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim29Q8R043 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim29Q8R043 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smim29Q8R043 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim29Q8R043 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim29Q8R043 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smim29Q8R043 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms