Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp28Q8CGV8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp28Q8CGV8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp28Q8CGV8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Gm5921-201ENSMUST00000075898 882 ntBASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Mmp28Q8CGV8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mmp28Q8CGV8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mmp28Q8CGV8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mmp28Q8CGV8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mmp28Q8CGV8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Mmp28Q8CGV8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.52■□□□□ 0.24
Mmp28Q8CGV8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Mmp28Q8CGV8 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.52■□□□□ 0.23
Mmp28Q8CGV8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Mmp28Q8CGV8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Mmp28Q8CGV8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Mmp28Q8CGV8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Mmp28Q8CGV8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 Gm45444-201ENSMUST00000211394 898 ntBASIC16.51■□□□□ 0.23
Mmp28Q8CGV8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms