Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cuedc1Q8R3V6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cuedc1Q8R3V6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cuedc1Q8R3V6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cuedc1Q8R3V6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cuedc1Q8R3V6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cuedc1Q8R3V6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cuedc1Q8R3V6 Gm11421-201ENSMUST00000122124 294 ntBASIC17.58■□□□□ 0.4
Cuedc1Q8R3V6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.58■□□□□ 0.4
Cuedc1Q8R3V6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.58■□□□□ 0.4
Cuedc1Q8R3V6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.58■□□□□ 0.4
Cuedc1Q8R3V6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cuedc1Q8R3V6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cuedc1Q8R3V6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
Cuedc1Q8R3V6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cuedc1Q8R3V6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cuedc1Q8R3V6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cuedc1Q8R3V6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms