Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YFT2YDR319C 825 nt3.47□□□□□ -1.85
SSH1P38353 CAF16YFL028C 870 nt3.47□□□□□ -1.85
SSH1P38353 YIL152WYIL152W 708 nt3.47□□□□□ -1.85
SSH1P38353 YKR047WYKR047W 306 nt3.47□□□□□ -1.85
SSH1P38353 YLL017WYLL017W 312 nt3.47□□□□□ -1.85
SSH1P38353 GAT3YLR013W 426 nt3.47□□□□□ -1.85
SSH1P38353 RPS31YLR167W 459 nt3.47□□□□□ -1.85
SSH1P38353 VPS71YML041C 843 nt3.47□□□□□ -1.85
SSH1P38353 YML116W-AYML116W-A 303 nt3.47□□□□□ -1.85
SSH1P38353 YNL057WYNL057W 333 nt3.47□□□□□ -1.85
SSH1P38353 SOF1YLL011W 1470 nt3.47□□□□□ -1.85
SSH1P38353 BIK1YCL029C 1323 nt3.46□□□□□ -1.85
SSH1P38353 PHO12YHR215W 1404 nt3.46□□□□□ -1.86
SSH1P38353 PHO11YAR071W 1404 nt3.46□□□□□ -1.86
SSH1P38353 YGL140CYGL140C 3660 nt3.46□□□□□ -1.86
SSH1P38353 AIM7YDR063W 450 nt3.46□□□□□ -1.86
SSH1P38353 RPS4BYHR203C 786 nt3.46□□□□□ -1.86
SSH1P38353 RPS4AYJR145C 786 nt3.46□□□□□ -1.86
SSH1P38353 MRPL3YMR024W 1173 nt3.46□□□□□ -1.86
SSH1P38353 TPP1YMR156C 717 nt3.46□□□□□ -1.86
SSH1P38353 YNR061CYNR061C 660 nt3.46□□□□□ -1.86
SSH1P38353 PEP4YPL154C 1218 nt3.46□□□□□ -1.86
SSH1P38353 BSD2YBR290W 966 nt3.46□□□□□ -1.86
SSH1P38353 FYV5YCL058C 459 nt3.46□□□□□ -1.86
SSH1P38353 PMT6YGR199W 2280 nt3.46□□□□□ -1.86
SSH1P38353 BUD27YFL023W 2391 nt3.46□□□□□ -1.86
SSH1P38353 RPO21YDL140C 5202 nt3.45□□□□□ -1.86
SSH1P38353 YCR050CYCR050C 309 nt3.45□□□□□ -1.86
SSH1P38353 COS7YDL248W 1152 nt3.45□□□□□ -1.86
SSH1P38353 YDR230WYDR230W 348 nt3.45□□□□□ -1.86
SSH1P38353 ERV14YGL054C 417 nt3.45□□□□□ -1.86
SSH1P38353 YGR015CYGR015C 987 nt3.45□□□□□ -1.86
SSH1P38353 YJR096WYJR096W 849 nt3.45□□□□□ -1.86
SSH1P38353 COS5YJR161C 1152 nt3.45□□□□□ -1.86
SSH1P38353 UTP23YOR004W 765 nt3.45□□□□□ -1.86
SSH1P38353 YPL088WYPL088W 1029 nt3.45□□□□□ -1.86
SSH1P38353 YBR134WYBR134W 402 nt3.45□□□□□ -1.86
SSH1P38353 GZF3YJL110C 1656 nt3.45□□□□□ -1.86
SSH1P38353 BCH2YKR027W 2298 nt3.45□□□□□ -1.86
SSH1P38353 IOC4YMR044W 1428 nt3.44□□□□□ -1.86
SSH1P38353 ALG11YNL048W 1647 nt3.44□□□□□ -1.86
SSH1P38353 YJR030CYJR030C 2238 nt3.44□□□□□ -1.86
SSH1P38353 PEX1YKL197C 3132 nt3.44□□□□□ -1.86
SSH1P38353 YLR177WYLR177W 1887 nt3.44□□□□□ -1.86
SSH1P38353 CNA1YLR433C 1662 nt3.44□□□□□ -1.86
SSH1P38353 YDR526CYDR526C 471 nt3.44□□□□□ -1.86
SSH1P38353 CMR3YPR013C 954 nt3.44□□□□□ -1.86
SSH1P38353 ZDS2YML109W 2829 nt3.44□□□□□ -1.86
SSH1P38353 YNR065CYNR065C 3351 nt3.44□□□□□ -1.86
SSH1P38353 GAC1YOR178C 2382 nt3.44□□□□□ -1.86
SSH1P38353 MLH2YLR035C 2088 nt3.43□□□□□ -1.86
SSH1P38353 YER034WYER034W 558 nt3.43□□□□□ -1.86
SSH1P38353 MOB2YFL034C-B 864 nt3.43□□□□□ -1.86
SSH1P38353 MMS2YGL087C 414 nt3.43□□□□□ -1.86
SSH1P38353 MMM1YLL006W 1281 nt3.43□□□□□ -1.86
SSH1P38353 REH1YLR387C 1299 nt3.43□□□□□ -1.86
SSH1P38353 YBL036CYBL036C 774 nt3.43□□□□□ -1.86
SSH1P38353 EOS1YNL080C 1101 nt3.43□□□□□ -1.86
SSH1P38353 NRK1YNL129W 723 nt3.43□□□□□ -1.86
SSH1P38353 RRP36YOR287C 903 nt3.43□□□□□ -1.86
SSH1P38353 YAR1YPL239W 603 nt3.43□□□□□ -1.86
SSH1P38353 APM1YPL259C 1428 nt3.43□□□□□ -1.86
SSH1P38353 CHD1YER164W 4407 nt3.42□□□□□ -1.86
SSH1P38353 YDL228CYDL228C 642 nt3.42□□□□□ -1.86
SSH1P38353 TAF10YDR167W 621 nt3.42□□□□□ -1.86
SSH1P38353 PFA5YDR459C 1125 nt3.42□□□□□ -1.86
SSH1P38353 YER076CYER076C 909 nt3.42□□□□□ -1.86
SSH1P38353 MAG1YER142C 891 nt3.42□□□□□ -1.86
SSH1P38353 YHB1YGR234W 1200 nt3.42□□□□□ -1.86
SSH1P38353 REC104YHR157W 549 nt3.42□□□□□ -1.86
SSH1P38353 HIS6YIL020C 786 nt3.42□□□□□ -1.86
SSH1P38353 CAP2YIL034C 864 nt3.42□□□□□ -1.86
SSH1P38353 HIS5YIL116W 1158 nt3.42□□□□□ -1.86
SSH1P38353 YKR075CYKR075C 924 nt3.42□□□□□ -1.86
SSH1P38353 UPS2YLR168C 693 nt3.42□□□□□ -1.86
SSH1P38353 GLO4YOR040W 858 nt3.42□□□□□ -1.86
SSH1P38353 STB3YDR169C 1542 nt3.42□□□□□ -1.86
SSH1P38353 NGL3YML118W 1518 nt3.42□□□□□ -1.86
SSH1P38353 ARX1YDR101C 1782 nt3.42□□□□□ -1.86
SSH1P38353 RNT1YMR239C 1416 nt3.42□□□□□ -1.86
SSH1P38353 FRT2YAL028W 1587 nt3.42□□□□□ -1.86
SSH1P38353 ATG21YPL100W 1491 nt3.41□□□□□ -1.86
SSH1P38353 PRP22YER013W 3438 nt3.41□□□□□ -1.86
SSH1P38353 KAP95YLR347C 2586 nt3.41□□□□□ -1.86
SSH1P38353 YBR225WYBR225W 2703 nt3.41□□□□□ -1.86
SSH1P38353 NSP1YJL041W 2472 nt3.41□□□□□ -1.86
SSH1P38353 YDR464C-AYDR464C-A 189 nt3.41□□□□□ -1.86
SSH1P38353 YGR126WYGR126W 693 nt3.41□□□□□ -1.86
SSH1P38353 MRP8YKL142W 660 nt3.41□□□□□ -1.86
SSH1P38353 ANT1YPR128C 987 nt3.41□□□□□ -1.86
SSH1P38353 SUC2YIL162W 1599 nt3.41□□□□□ -1.86
SSH1P38353 VAC17YCL063W 1272 nt3.4□□□□□ -1.87
SSH1P38353 MIG3YER028C 1185 nt3.4□□□□□ -1.87
SSH1P38353 YGL108CYGL108C 423 nt3.4□□□□□ -1.87
SSH1P38353 PIR3YKL163W 978 nt3.4□□□□□ -1.87
SSH1P38353 YLR402WYLR402W 192 nt3.4□□□□□ -1.87
SSH1P38353 NIS1YNL078W 1224 nt3.4□□□□□ -1.87
SSH1P38353 YGK3YOL128C 1128 nt3.4□□□□□ -1.87
SSH1P38353 SEA4YBL104C 3117 nt3.4□□□□□ -1.87
SSH1P38353 ROK1YGL171W 1695 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 38.1 ms