Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Gm11687-201ENSMUST00000118911 886 ntBASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ebf4Q8K4J2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf4Q8K4J2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ebf4Q8K4J2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ebf4Q8K4J2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ebf4Q8K4J2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf4Q8K4J2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf4Q8K4J2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf4Q8K4J2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf4Q8K4J2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf4Q8K4J2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf4Q8K4J2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ebf4Q8K4J2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ebf4Q8K4J2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ebf4Q8K4J2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 BC021767-201ENSMUST00000126387 1716 ntBASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf4Q8K4J2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf4Q8K4J2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms