Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.36■□□□□ 0.69
Lrif1Q8CDD9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrif1Q8CDD9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrif1Q8CDD9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrif1Q8CDD9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrif1Q8CDD9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrif1Q8CDD9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Lrif1Q8CDD9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Lrif1Q8CDD9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrif1Q8CDD9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrif1Q8CDD9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Lrif1Q8CDD9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.33■□□□□ 0.69
Lrif1Q8CDD9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrif1Q8CDD9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lrif1Q8CDD9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lrif1Q8CDD9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrif1Q8CDD9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lrif1Q8CDD9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrif1Q8CDD9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lrif1Q8CDD9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Lrif1Q8CDD9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms