Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Q8VDP2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8VDP2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Q8VDP2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8VDP2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8VDP2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8VDP2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Q8VDP2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8VDP2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8VDP2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8VDP2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Q8VDP2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Q8VDP2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.11■□□□□ 0.65
Q8VDP2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Q8VDP2 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.11■□□□□ 0.65
Q8VDP2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Q8VDP2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Q8VDP2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Q8VDP2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8VDP2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8VDP2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Q8VDP2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.1■□□□□ 0.65
Q8VDP2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.1■□□□□ 0.65
Q8VDP2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Q8VDP2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8VDP2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8VDP2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8VDP2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.09■□□□□ 0.65
Q8VDP2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q8VDP2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Q8VDP2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Q8VDP2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Q8VDP2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q8VDP2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.08■□□□□ 0.65
Q8VDP2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Q8VDP2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q8VDP2 Gm11175-201ENSMUST00000116172 543 ntBASIC19.08■□□□□ 0.64
Q8VDP2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Q8VDP2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q8VDP2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Q8VDP2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q8VDP2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.08■□□□□ 0.64
Q8VDP2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q8VDP2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q8VDP2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Q8VDP2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Q8VDP2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q8VDP2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q8VDP2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q8VDP2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Q8VDP2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.07■□□□□ 0.64
Q8VDP2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q8VDP2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.07■□□□□ 0.64
Q8VDP2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Q8VDP2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q8VDP2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.07■□□□□ 0.64
Q8VDP2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Q8VDP2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Q8VDP2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Q8VDP2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q8VDP2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q8VDP2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q8VDP2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Q8VDP2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Q8VDP2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.05■□□□□ 0.64
Q8VDP2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q8VDP2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Q8VDP2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Q8VDP2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.05■□□□□ 0.64
Q8VDP2 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.05■□□□□ 0.64
Q8VDP2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q8VDP2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q8VDP2 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.04■□□□□ 0.64
Q8VDP2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Q8VDP2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q8VDP2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q8VDP2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q8VDP2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q8VDP2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Q8VDP2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Q8VDP2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.04■□□□□ 0.64
Q8VDP2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q8VDP2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms