Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.76■□□□□ 0.91
Scube3Q66PY1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scube3Q66PY1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scube3Q66PY1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scube3Q66PY1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.75■□□□□ 0.91
Scube3Q66PY1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.75■□□□□ 0.91
Scube3Q66PY1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scube3Q66PY1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scube3Q66PY1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scube3Q66PY1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scube3Q66PY1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scube3Q66PY1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scube3Q66PY1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scube3Q66PY1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scube3Q66PY1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scube3Q66PY1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scube3Q66PY1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scube3Q66PY1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Scube3Q66PY1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Scube3Q66PY1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.73■□□□□ 0.91
Scube3Q66PY1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.72■□□□□ 0.91
Scube3Q66PY1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.72■□□□□ 0.91
Scube3Q66PY1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scube3Q66PY1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.71■□□□□ 0.91
Scube3Q66PY1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.71■□□□□ 0.91
Scube3Q66PY1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Smad6-203ENSMUST00000179458 273 ntBASIC20.71■□□□□ 0.91
Scube3Q66PY1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scube3Q66PY1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Scube3Q66PY1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Scube3Q66PY1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scube3Q66PY1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scube3Q66PY1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scube3Q66PY1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.7■□□□□ 0.9
Scube3Q66PY1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Scube3Q66PY1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scube3Q66PY1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scube3Q66PY1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scube3Q66PY1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scube3Q66PY1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Scube3Q66PY1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scube3Q66PY1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.68■□□□□ 0.9
Scube3Q66PY1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Scube3Q66PY1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scube3Q66PY1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Scube3Q66PY1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scube3Q66PY1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube3Q66PY1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube3Q66PY1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube3Q66PY1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scube3Q66PY1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube3Q66PY1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube3Q66PY1 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.67■□□□□ 0.9
Scube3Q66PY1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scube3Q66PY1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scube3Q66PY1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scube3Q66PY1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scube3Q66PY1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scube3Q66PY1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms