Protein–RNA interactions for Protein: Q3ULP7

Ctsll3, Cathepsin L-like 3, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctsll3Q3ULP7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctsll3Q3ULP7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctsll3Q3ULP7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctsll3Q3ULP7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Mir5133-201ENSMUST00000174955 77 ntBASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ctsll3Q3ULP7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctsll3Q3ULP7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Gm12441-201ENSMUST00000121806 588 ntBASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctsll3Q3ULP7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctsll3Q3ULP7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctsll3Q3ULP7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ctsll3Q3ULP7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.14■□□□□ 0.49
Ctsll3Q3ULP7 Gm10653-202ENSMUST00000139570 835 ntBASIC18.14■□□□□ 0.49
Ctsll3Q3ULP7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.14■□□□□ 0.49
Ctsll3Q3ULP7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ctsll3Q3ULP7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctsll3Q3ULP7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctsll3Q3ULP7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ctsll3Q3ULP7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ctsll3Q3ULP7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctsll3Q3ULP7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ctsll3Q3ULP7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctsll3Q3ULP7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctsll3Q3ULP7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ctsll3Q3ULP7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctsll3Q3ULP7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms