Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.97■□□□□ 0.95
Znf235Q61116 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Znf235Q61116 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Znf235Q61116 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Znf235Q61116 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Znf235Q61116 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Znf235Q61116 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Znf235Q61116 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Znf235Q61116 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Znf235Q61116 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Znf235Q61116 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Znf235Q61116 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.96■□□□□ 0.95
Znf235Q61116 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Znf235Q61116 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.96■□□□□ 0.95
Znf235Q61116 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.96■□□□□ 0.95
Znf235Q61116 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.96■□□□□ 0.95
Znf235Q61116 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.96■□□□□ 0.95
Znf235Q61116 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Znf235Q61116 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Znf235Q61116 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Znf235Q61116 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Znf235Q61116 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Znf235Q61116 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Znf235Q61116 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.95■□□□□ 0.94
Znf235Q61116 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Znf235Q61116 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.95■□□□□ 0.94
Znf235Q61116 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Znf235Q61116 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.94■□□□□ 0.94
Znf235Q61116 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Znf235Q61116 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.94■□□□□ 0.94
Znf235Q61116 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.94■□□□□ 0.94
Znf235Q61116 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Znf235Q61116 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Znf235Q61116 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Znf235Q61116 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
Znf235Q61116 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Znf235Q61116 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Znf235Q61116 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Znf235Q61116 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Znf235Q61116 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Znf235Q61116 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Znf235Q61116 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Znf235Q61116 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Znf235Q61116 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Znf235Q61116 Gm42642-201ENSMUST00000200683 355 ntBASIC20.92■□□□□ 0.94
Znf235Q61116 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Znf235Q61116 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Znf235Q61116 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.92■□□□□ 0.94
Znf235Q61116 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Znf235Q61116 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Znf235Q61116 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Znf235Q61116 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Znf235Q61116 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Znf235Q61116 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.91■□□□□ 0.94
Znf235Q61116 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Znf235Q61116 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Znf235Q61116 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.91■□□□□ 0.94
Znf235Q61116 Gm10033-202ENSMUST00000211874 928 ntBASIC20.91■□□□□ 0.94
Znf235Q61116 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.91■□□□□ 0.94
Znf235Q61116 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Znf235Q61116 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Znf235Q61116 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Znf235Q61116 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Znf235Q61116 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Znf235Q61116 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Znf235Q61116 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Znf235Q61116 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.9■□□□□ 0.94
Znf235Q61116 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Znf235Q61116 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Znf235Q61116 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.89■□□□□ 0.94
Znf235Q61116 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Znf235Q61116 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Znf235Q61116 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Znf235Q61116 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Znf235Q61116 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Znf235Q61116 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.89■□□□□ 0.93
Znf235Q61116 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Znf235Q61116 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.89■□□□□ 0.93
Znf235Q61116 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Znf235Q61116 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Znf235Q61116 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.88■□□□□ 0.93
Znf235Q61116 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.88■□□□□ 0.93
Znf235Q61116 Gm27801-201ENSMUST00000184174 223 ntBASIC20.88■□□□□ 0.93
Znf235Q61116 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.88■□□□□ 0.93
Znf235Q61116 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Znf235Q61116 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Znf235Q61116 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Znf235Q61116 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Znf235Q61116 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Znf235Q61116 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Znf235Q61116 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Znf235Q61116 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Znf235Q61116 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.87■□□□□ 0.93
Znf235Q61116 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.87■□□□□ 0.93
Znf235Q61116 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.87■□□□□ 0.93
Znf235Q61116 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.87■□□□□ 0.93
Znf235Q61116 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Znf235Q61116 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Znf235Q61116 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.87■□□□□ 0.93
Znf235Q61116 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms