Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Cgnl1Q6AW69 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Cgnl1Q6AW69 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cgnl1Q6AW69 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.68■■□□□ 1.54
Cgnl1Q6AW69 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.68■■□□□ 1.54
Cgnl1Q6AW69 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cgnl1Q6AW69 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cgnl1Q6AW69 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cgnl1Q6AW69 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.67■■□□□ 1.54
Cgnl1Q6AW69 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cgnl1Q6AW69 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cgnl1Q6AW69 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Cgnl1Q6AW69 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
Cgnl1Q6AW69 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cgnl1Q6AW69 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Cgnl1Q6AW69 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cgnl1Q6AW69 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cgnl1Q6AW69 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cgnl1Q6AW69 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cgnl1Q6AW69 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Cgnl1Q6AW69 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cgnl1Q6AW69 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Cgnl1Q6AW69 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cgnl1Q6AW69 Gm22238-201ENSMUST00000175222 88 ntBASIC24.65■■□□□ 1.54
Cgnl1Q6AW69 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cgnl1Q6AW69 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cgnl1Q6AW69 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cgnl1Q6AW69 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Cgnl1Q6AW69 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cgnl1Q6AW69 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.64■■□□□ 1.54
Cgnl1Q6AW69 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Cgnl1Q6AW69 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cgnl1Q6AW69 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cgnl1Q6AW69 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cgnl1Q6AW69 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cgnl1Q6AW69 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cgnl1Q6AW69 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Cgnl1Q6AW69 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cgnl1Q6AW69 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Gm43909-201ENSMUST00000203443 1876 ntBASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cgnl1Q6AW69 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Cgnl1Q6AW69 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cgnl1Q6AW69 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Cgnl1Q6AW69 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Cgnl1Q6AW69 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cgnl1Q6AW69 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Cgnl1Q6AW69 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Cgnl1Q6AW69 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Cgnl1Q6AW69 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cgnl1Q6AW69 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.58■■□□□ 1.53
Cgnl1Q6AW69 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cgnl1Q6AW69 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cgnl1Q6AW69 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Cgnl1Q6AW69 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cgnl1Q6AW69 Gm15043-201ENSMUST00000118843 1543 ntBASIC24.57■■□□□ 1.52
Cgnl1Q6AW69 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Cgnl1Q6AW69 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cgnl1Q6AW69 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.57■■□□□ 1.52
Cgnl1Q6AW69 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
Cgnl1Q6AW69 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cgnl1Q6AW69 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cgnl1Q6AW69 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms