Protein–RNA interactions for Protein: Q9JM61

Thsd1, Thrombospondin type-1 domain-containing protein 1, mousemouse

Predictions only

Length 851 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thsd1Q9JM61 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Thsd1Q9JM61 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.12■■□□□ 1.45
Thsd1Q9JM61 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Thsd1Q9JM61 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.11■■□□□ 1.45
Thsd1Q9JM61 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Thsd1Q9JM61 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Thsd1Q9JM61 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Thsd1Q9JM61 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Thsd1Q9JM61 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Thsd1Q9JM61 Gm16148-201ENSMUST00000119653 893 ntBASIC24.05■■□□□ 1.44
Thsd1Q9JM61 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.05■■□□□ 1.44
Thsd1Q9JM61 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Thsd1Q9JM61 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
Thsd1Q9JM61 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.01■■□□□ 1.43
Thsd1Q9JM61 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
Thsd1Q9JM61 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Thsd1Q9JM61 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Thsd1Q9JM61 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Thsd1Q9JM61 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Thsd1Q9JM61 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Thsd1Q9JM61 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Thsd1Q9JM61 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Thsd1Q9JM61 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.95■■□□□ 1.42
Thsd1Q9JM61 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Thsd1Q9JM61 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Thsd1Q9JM61 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.94■■□□□ 1.42
Thsd1Q9JM61 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Thsd1Q9JM61 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Thsd1Q9JM61 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.89■■□□□ 1.41
Thsd1Q9JM61 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.89■■□□□ 1.41
Thsd1Q9JM61 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
Thsd1Q9JM61 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Thsd1Q9JM61 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Thsd1Q9JM61 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.84■■□□□ 1.41
Thsd1Q9JM61 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Thsd1Q9JM61 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.84■■□□□ 1.41
Thsd1Q9JM61 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Thsd1Q9JM61 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Thsd1Q9JM61 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Thsd1Q9JM61 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Thsd1Q9JM61 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.78■■□□□ 1.4
Thsd1Q9JM61 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.75■■□□□ 1.39
Thsd1Q9JM61 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Thsd1Q9JM61 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Thsd1Q9JM61 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Thsd1Q9JM61 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Thsd1Q9JM61 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Thsd1Q9JM61 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Thsd1Q9JM61 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Thsd1Q9JM61 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.71■■□□□ 1.39
Thsd1Q9JM61 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
Thsd1Q9JM61 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
Thsd1Q9JM61 Peli2-204ENSMUST00000226513 1320 ntBASIC23.7■■□□□ 1.38
Thsd1Q9JM61 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Thsd1Q9JM61 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Thsd1Q9JM61 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Thsd1Q9JM61 Gm45855-201ENSMUST00000212546 880 ntBASIC23.68■■□□□ 1.38
Thsd1Q9JM61 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Thsd1Q9JM61 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Thsd1Q9JM61 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Thsd1Q9JM61 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Thsd1Q9JM61 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Thsd1Q9JM61 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.64■■□□□ 1.37
Thsd1Q9JM61 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Thsd1Q9JM61 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Thsd1Q9JM61 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Thsd1Q9JM61 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Thsd1Q9JM61 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Thsd1Q9JM61 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Thsd1Q9JM61 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Thsd1Q9JM61 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Thsd1Q9JM61 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Thsd1Q9JM61 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Thsd1Q9JM61 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Thsd1Q9JM61 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Thsd1Q9JM61 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Thsd1Q9JM61 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.53■■□□□ 1.36
Thsd1Q9JM61 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.52■■□□□ 1.36
Thsd1Q9JM61 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Thsd1Q9JM61 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Thsd1Q9JM61 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Thsd1Q9JM61 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Thsd1Q9JM61 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Thsd1Q9JM61 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Thsd1Q9JM61 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Thsd1Q9JM61 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.47■■□□□ 1.35
Thsd1Q9JM61 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Thsd1Q9JM61 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Thsd1Q9JM61 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Thsd1Q9JM61 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.45■■□□□ 1.34
Thsd1Q9JM61 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Thsd1Q9JM61 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Thsd1Q9JM61 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Thsd1Q9JM61 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Thsd1Q9JM61 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Thsd1Q9JM61 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Thsd1Q9JM61 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Thsd1Q9JM61 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Thsd1Q9JM61 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Thsd1Q9JM61 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms