Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Scn5aQ9JJV9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Scn5aQ9JJV9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.23■■■□□ 2.11
Scn5aQ9JJV9 Mipep-204ENSMUST00000225043 1548 ntBASIC28.23■■■□□ 2.11
Scn5aQ9JJV9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Scn5aQ9JJV9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.21■■■□□ 2.11
Scn5aQ9JJV9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Scn5aQ9JJV9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Scn5aQ9JJV9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.18■■■□□ 2.1
Scn5aQ9JJV9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.18■■■□□ 2.1
Scn5aQ9JJV9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Scn5aQ9JJV9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Scn5aQ9JJV9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.12■■■□□ 2.09
Scn5aQ9JJV9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Scn5aQ9JJV9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Scn5aQ9JJV9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Scn5aQ9JJV9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Scn5aQ9JJV9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Scn5aQ9JJV9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Scn5aQ9JJV9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Scn5aQ9JJV9 Gm45855-201ENSMUST00000212546 880 ntBASIC28.02■■■□□ 2.08
Scn5aQ9JJV9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Scn5aQ9JJV9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.01■■■□□ 2.07
Scn5aQ9JJV9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.01■■■□□ 2.07
Scn5aQ9JJV9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Scn5aQ9JJV9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Scn5aQ9JJV9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.97■■■□□ 2.07
Scn5aQ9JJV9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Scn5aQ9JJV9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scn5aQ9JJV9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scn5aQ9JJV9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Scn5aQ9JJV9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Scn5aQ9JJV9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Scn5aQ9JJV9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Scn5aQ9JJV9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Scn5aQ9JJV9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Scn5aQ9JJV9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.87■■■□□ 2.05
Scn5aQ9JJV9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Scn5aQ9JJV9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Scn5aQ9JJV9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
Scn5aQ9JJV9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Scn5aQ9JJV9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Scn5aQ9JJV9 Gm9397-201ENSMUST00000200125 605 ntBASIC27.8■■■□□ 2.04
Scn5aQ9JJV9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Scn5aQ9JJV9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Scn5aQ9JJV9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Scn5aQ9JJV9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Scn5aQ9JJV9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Scn5aQ9JJV9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Scn5aQ9JJV9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Scn5aQ9JJV9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.72■■■□□ 2.03
Scn5aQ9JJV9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Scn5aQ9JJV9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
Scn5aQ9JJV9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.68■■■□□ 2.02
Scn5aQ9JJV9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.68■■■□□ 2.02
Scn5aQ9JJV9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Scn5aQ9JJV9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.67■■■□□ 2.02
Scn5aQ9JJV9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Scn5aQ9JJV9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Scn5aQ9JJV9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.63■■■□□ 2.01
Scn5aQ9JJV9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Scn5aQ9JJV9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.62■■■□□ 2.01
Scn5aQ9JJV9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Scn5aQ9JJV9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Scn5aQ9JJV9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Scn5aQ9JJV9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Scn5aQ9JJV9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Scn5aQ9JJV9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.58■■■□□ 2.01
Scn5aQ9JJV9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Scn5aQ9JJV9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Scn5aQ9JJV9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Scn5aQ9JJV9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Scn5aQ9JJV9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.56■■■□□ 2
Scn5aQ9JJV9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.54■■■□□ 2
Scn5aQ9JJV9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
Scn5aQ9JJV9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Scn5aQ9JJV9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Scn5aQ9JJV9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Scn5aQ9JJV9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Scn5aQ9JJV9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Scn5aQ9JJV9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
Scn5aQ9JJV9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.43■■□□□ 1.98
Scn5aQ9JJV9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.43■■□□□ 1.98
Scn5aQ9JJV9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Scn5aQ9JJV9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Scn5aQ9JJV9 Gm24970-201ENSMUST00000175582 82 ntBASIC27.38■■□□□ 1.97
Scn5aQ9JJV9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Scn5aQ9JJV9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Scn5aQ9JJV9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Scn5aQ9JJV9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Scn5aQ9JJV9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Scn5aQ9JJV9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Scn5aQ9JJV9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Scn5aQ9JJV9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Scn5aQ9JJV9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Scn5aQ9JJV9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.96
Scn5aQ9JJV9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Scn5aQ9JJV9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.32■■□□□ 1.96
Scn5aQ9JJV9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.32■■□□□ 1.96
Scn5aQ9JJV9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms